Evidence map›Paper›PMID 39530270›Full record

ArticleBiometrics2024

Bayesian pathway analysis over brain network mediators for survival data.

Xinyuan Tian, Fan Li, Li Shen, Denise Esserman, Yize Zhao

Abstract read
In one paragraph

Article in Biometrics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Xinyuan TianDepartment of Biostatistics, Yale School of Public Health, New Haven, CT 06511, United States.
Fan LiDepartment of Biostatistics, Yale School of Public Health, New Haven, CT 06511, United States.ORCID 0000-0001-6183-1893
Li ShenDepartment of Biostatistics, Epidemiology and Informatics, University of Pennsylvania, Philadelphia, PA 19104, United States.ORCID 0000-0002-5443-0503
Denise EssermanDepartment of Biostatistics, Yale School of Public Health, New Haven, CT 06511, United States.
Yize ZhaoDepartment of Biostatistics, Yale School of Public Health, New Haven, CT 06511, United States.ORCID 0000-0001-6283-2302

Funding

Yale Clinical and Translational Science Award (U Component)UL1TR001863 · NCATS · YALE UNIVERSITY · PI John H. Krystal, LUCILA OHNO-MACHADO · 2016 to 2026
$102.9M
Yale Alzheimer Disease Research CenterP30AG066508 · NIA · YALE UNIVERSITY · PI STEPHEN M STRITTMATTER · 2020 to 2026
$30.2M
An integrative Bayesian approach for linking brain to behavioral phenotypeR01EB034720 · NIBIB · YALE UNIVERSITY · PI R Todd Constable, Yize Zhao · 2023 to 2026
$2.4M
Integrative analysis for patient-centered outcomes and time-to-event data in Alzheimer's diseaseRF1AG081413 · NIA · YALE UNIVERSITY · PI SUN, YIFEI, ZHAO, YIZE · 2023 to 2023
$2.3M
Novel integrative imaging genetics analysis for Alzheimer's disease riskand progressionRF1AG068191 · NIA · YALE UNIVERSITY · PI ZHAO, YIZE · 2021 to 2021
$1.9M
Novel integrative imaging genetics analysis for Alzheimer's disease riskand progressionR01AG068191 · NIA · YALE UNIVERSITY · PI ZHAO, YIZE · 2024 to 2025
$1.2M
NCATS NIH HHS UL1 TR001863NIA NIH HHS P30 AG066508NIA NIH HHS R01 AG068191NIA NIH HHS RF1 AG068191NIA NIH HHS RF1 AG081413NIBIB NIH HHS R01 EB034720NIH HHS RF1AG081413
6 · The paper itself

Abstract

Technological advancements in noninvasive imaging facilitate the construction of whole brain interconnected networks, known as brain connectivity. Existing approaches to analyze brain connectivity frequently disaggregate the entire network into a vector of unique edges or summary measures, leading to a substantial loss of information. Motivated by the need to explore the effect mechanism among genetic exposure, brain connectivity, and time to disease onset with maximum information extraction, we propose a Bayesian approach to model the effect pathway between each of these components while quantifying the mediating role of brain networks. To accommodate the biological architectures of brain connectivity constructed along white matter fiber tracts, we develop a structural model which includes a symmetric matrix-variate accelerated failure time model for disease onset and a symmetric matrix response regression for the network-variate mediator. We further impose within-graph sparsity and between-graph shrinkage to identify informative network configurations and eliminate the interference of noisy components. Simulations are carried out to confirm the advantages of our proposed method over existing alternatives. By applying the proposed method to the landmark Alzheimer's Disease Neuroimaging Initiative study, we obtain neurobiologically plausible insights that may inform future intervention strategies.

Indexed as

Alzheimer DiseaseBayes TheoremBrainComputer SimulationHumansModels, StatisticalNerve NetNeuroimagingSurvival Analysisaccelerated failure time modelbrain connectivityimaging geneticsmediation analysisnatural indirect effectshrinkage and regularization

Identifiers

PMID39530270
PMCPMC11555425

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.