ArticleNature methods2025
ONIX: a unified open-source platform for multimodal neural recording and perturbation during naturalistic behavior.
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Article in Nature methods, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 29 papers.
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29citing papers in PubMed
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29 citing papers in PubMed.
- Assessing hearing and hearing loss in mice with open-source system and auditory brainstem response (OpenSABR).Journal of neurophysiology · 2026Article
- A wireless modular platform for neuro-behavioral recording and closed-loop manipulation in small animals.Nature methods · 2026Article
- Miniscope Zero: a fully wireless, single-cell-resolution miniature microscope for imaging neural dynamics in freely behaving animals.bioRxiv : the preprint server for biology · 2026Article
- Voltage imaging of neurons distributed across entire brains of larval zebrafish.Nature methods · 2026Article
- Efficient and reproducible pipelines for spike sorting large-scale electrophysiology data.eLife · 2026Article
- Ecological Visual Processing in the Mouse.Annual review of neuroscience · 2026Review
- Full-Stack Architectures for Intelligent Brain-Computer Interfaces.Advanced science (Weinheim, Baden-Wurttemberg, Germany) · 2026Review
- Large-scale electrophysiology at single-spike resolution.Nature reviews. Neuroscience · 2026Review
- E-Link: A 256-ch Mini-Pedestal Connector for High-Density Soft Neural Interfaces.IEEE journal on flexible electronics · 2026Article
- Protocol to build open-source Discrimin8 maze to study discrimination of reward-context associations in mice during open-field foraging.STAR protocols · 2026Article
- Open-Source Platform for Adjustable Training Regimes in Freely Moving and Head-Fixed Mice.eNeuro · 2026Article
- Breaking the snapshot barrier: electrochemical biosensors for real-time in-vivo abscisic acid (ABA) tracking in dynamic environments.Mikrochimica acta · 2026Review
- An open-source system for recording the auditory brainstem response (ABR) and an example application in mice with hearing loss.bioRxiv : the preprint server for biology · 2025Article
- Iris 128x: open-source 128 channel headstages for neural stimulation and recording.Journal of neural engineering · 2025Article
- Pan-cortical cellular imaging in freely behaving mice using a miniaturized micro-camera array microscope (mini-MCAM).Science advances · 2025Article
- Dentate spikes comprise a continuum of relative input strength from the lateral and medial entorhinal cortex.bioRxiv : the preprint server for biology · 2025Article
- DISSeCT: An unsupervised framework for high-resolution mapping of rodent behavior using inertial sensors.PLoS biology · 2025Article
- A modular, adaptable, and accessible implant kit for chronic electrophysiological recordings in rats.Cell reports methods · 2025Article
- Perspective on Nano-Enabled Photostimulation Biointerfaces.ACS nano · 2025Review
- Spatial reasoning via recurrent neural dynamics in mouse retrosplenial cortex.Nature neuroscience · 2025Article
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Authors and funding
14 authors.
Jonathan P Newman *Department of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.
Jie Zhang *Department of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.
Aarón Cuevas-López *Open Ephys, Atlanta, GA, USA.ORCID http://orcid.org/0000-0002-1228-5045
Nicholas J MillerDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.
Takato HondaDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.ORCID http://orcid.org/0000-0002-3327-8282
Marie-Sophie H van der GoesDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-5251-6664
Alexandra H LeightonOpen Ephys Production Site, Lisbon, Portugal.ORCID http://orcid.org/0000-0003-0021-7261
Filipe CarvalhoOpen Ephys Production Site, Lisbon, Portugal.
Gonçalo LopesNeuroGEARS, London, UK.
Anna LakuninaAllen Institute for Neural Dynamics, Seattle, WA, USA.ORCID http://orcid.org/0000-0003-2628-8834
Joshua H SiegleOpen Ephys, Atlanta, GA, USA.ORCID http://orcid.org/0000-0002-7736-4844
Mark T HarnettDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.
Matthew A WilsonDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA.ORCID http://orcid.org/0000-0001-7149-3584
Jakob VoigtsDepartment of Brain and Cognitive Sciences, MIT, Cambridge, MA, USA. voigtsj@janelia.hhmi.org.ORCID http://orcid.org/0000-0002-5174-7214
Funding
Medical Scientist Training ProgramT32GM007753 · NIGMS · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI WALENSKY, LOREN DAVID · 1985 to 2021
$50.0MCRNS: An Integrative Study of Hippocampal-Neocortical Memory Coding during Sleep R01MH118928 · NIMH · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI CHEN, ZHE SAGE, WILSON, MATTHEW A · 2018 to 2022
$1.8MA dendritic mechanism for cholinergic neuromodulation of cortical functionR01NS106031 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI HARNETT, MARK THOMAS · 2018 to 2022
$1.7MONIX: A Neural Acquisition System for Unencumbered, Closed-Loop Recordings in Small, Freely Moving AnimalsR44NS127725 · NINDS · OPEN EPHYS, INC · PI NEWMAN, JONATHAN · 2022 to 2023
$1.4MIntegrated compressive sensing microscope for high-speed functional biological imagingR21EY028381 · NEI · BOSTON UNIVERSITY (CHARLES RIVER CAMPUS) · PI CHIN, SANG PETER · 2017 to 2018
$490kSupplement: Robotic Platform for High-Densisty in Vivo Intracellular recordingR21NS103098 · NINDS · UNIVERSITY OF MINNESOTA · PI HARNETT, MARK THOMAS, KODANDARAMAIAH, SUHASA B · 2017 to 2018
$483kNetwork and dendritic mechanisms of context-dependent cortical computationK99NS118112 · NINDS · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI VOIGTS, JAKOB · 2020 to 2021
$207kRevealing the causal role of hippocampal dopamine signaling in spatial learningF32MH107086 · NIMH · MASSACHUSETTS INSTITUTE OF TECHNOLOGY · PI NEWMAN, JONATHAN · 2015 to 2017
$168kNEI NIH HHS R21 EY028381NIGMS NIH HHS T32 GM007753NIMH NIH HHS F32 MH107086NIMH NIH HHS R01 MH118928NINDS NIH HHS K99 NS118112NINDS NIH HHS R01 NS106031NINDS NIH HHS R21 NS103098NINDS NIH HHS R44 NS127725U.S. Department of Health & Human Services | NIH | National Institute of General Medical Sciences (NIGMS) T32GM007753
Abstract
Behavioral neuroscience faces two conflicting demands: long-duration recordings from large neural populations and unimpeded animal behavior. To meet this challenge we developed ONIX, an open-source data acquisition system with high data throughput (2 GB s
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Behavior, AnimalNeuronsSoftwareAnimalsMaleMiceMice, Inbred C57BLSleep
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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.