Evidence map›Paper›PMID 39528527›Full record

ArticleNature communications2024

Structure-derived insights from blood factors binding to the surfaces of different adenoviruses.

Haley E Mudrick, Shao-Chia Lu, Janarjan Bhandari, Mary E Barry, Jack R Hemsath, Felix G M Andres, Olivia X Ma, Michael A Barry, Vijay S Reddy

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Developing the next-generation of adenoviral vector vaccines.Human vaccines & immunotherapeutics · 2025
    Review
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Haley E Mudrick *Molecular Pharmacology and Experimental Therapeutics Graduate Program, Mayo Clinic, Rochester, MN, 55905, USA.ORCID 0000-0002-2716-5513
Shao-Chia Lu *Department of Internal Medicine, Division of Infectious Diseases, Mayo Clinic, Rochester, MN, 55905, USA.ORCID 0000-0002-5701-4433
Janarjan BhandariThe Hormel Institute, University of Minnesota, Austin, MN, 55912, USA.ORCID 0000-0002-3900-9067
Mary E BarryDepartment of Internal Medicine, Division of Infectious Diseases, Mayo Clinic, Rochester, MN, 55905, USA.
Jack R HemsathDepartment of Internal Medicine, Division of Infectious Diseases, Mayo Clinic, Rochester, MN, 55905, USA.ORCID 0000-0003-1486-9906
Felix G M AndresDepartment of Internal Medicine, Division of Infectious Diseases, Mayo Clinic, Rochester, MN, 55905, USA.ORCID 0009-0008-9937-3355
Olivia X MaThe Hormel Institute, University of Minnesota, Austin, MN, 55912, USA.
Michael A BarryDepartment of Internal Medicine, Division of Infectious Diseases, Mayo Clinic, Rochester, MN, 55905, USA. mab@mayo.edu.ORCID 0000-0002-8568-5664
Vijay S ReddyThe Hormel Institute, University of Minnesota, Austin, MN, 55912, USA. vsreddy@umn.edu.ORCID 0000-0003-4638-8277

Funding

Shielding Replicating Single-cycle Vaccines against SARS-CoV-2R56AI161367 · NIAID · MAYO CLINIC ROCHESTER · PI BARRY, MICHAEL A · 2023 to 2023
$471k
NIAID NIH HHS R56 AI161367U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI161367
6 · The paper itself

Abstract

The tropism of adenoviruses (Ads) is significantly influenced by the binding of various blood factors. To investigate differences in their binding, we conducted cryo-EM analysis on complexes of several human adenoviruses with human platelet factor-4 (PF4), coagulation factors FII (Prothrombin), and FX. While we observed EM densities for FII and FX bound to all the species-C adenoviruses examined, no densities were seen for PF4, even though PF4 can co-pellet with various Ads. Similar to FX, the γ-carboxyglutamic acid (Gla) domain of FII binds within the surface cavity of hexon trimers. While FII binds equally to species-C Ads: Ad5, Ad6, and Ad657, FX exhibits significantly better binding to Ad5 and Ad657 compared to Ad6. Although only the FX-Gla domain is observed at high-resolution (3.7 Å), the entire FX is visible at low-resolution bound to Ad5 in three equivalent binding modes consistent with the 3-fold symmetric hexon. Only the Gla and kringle-1 domains of FII are visible on all the species-C adenoviruses, where the rigid FII binds in an upright fashion, in contrast to the flexible and bent FX. These data suggest that differential binding of FII and FX may shield certain species-C adenoviruses differently against immune molecules, thereby modulating their tropism.

Indexed as

Adenoviruses, HumanCryoelectron MicroscopyFactor XPlatelet Factor 4Protein BindingAdenoviridaeCapsid ProteinsHumansModels, MolecularProtein DomainsProthrombinCapsid ProteinsFactor Xhexon capsid protein, AdenovirusPF4 protein, humanPlatelet Factor 4Prothrombin

Identifiers

PMID39528527
PMCPMC11555213

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.