Evidence map›Paper›PMID 39528448›Full record

ArticleNature communications2024

Rapid prediction of molecular crystal structures using simple topological and physical descriptors.

Nikolaos Galanakis, Mark E Tuckerman

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Unlocking COiScience · 2025
    Review
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Nikolaos GalanakisDepartment of Chemistry, New York University, New York, NY, USA. ng1807@nyu.edu.
Mark E TuckermanDepartment of Chemistry, New York University, New York, NY, USA. mark.tuckerman@nyu.edu.ORCID http://orcid.org/0000-0003-2194-9955

Funding

National Science Foundation (NSF) CHE-1955381National Science Foundation (NSF) DMR-2118890
6 · The paper itself

Abstract

Organic molecular crystals constitute a class of materials of critical importance in numerous industries. Despite the ubiquity of these systems, our ability to predict molecular crystal structures starting only from a two-dimensional diagram of the constituent compound(s) remains a significant challenge. Most structure-prediction protocols require a customized interatomic interaction model on which the quality of the results can depend sensitively. To overcome this problem, we introduce a new topological approach to molecular crystal structure prediction. The approach posits that in a stable structure, molecules are oriented such that principal axes and normal ring plane vectors are aligned with specific crystallographic directions and that heavy atoms occupy positions that correspond to minima of a set of geometric order parameters. By minimizing an objective function that encodes these orientations and atomic positions, and filtering based on the vdW free volume and intermolecular close contact distributions derived from the Cambridge Structural Database, stable structures and polymorphs for a given crystal can be predicted entirely mathematically without reliance on an interaction model.

Identifiers

PMID39528448
PMCPMC11555391

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.