Evidence map›Paper›PMID 39522951›Full record

ArticleMolecular oncology2025

Replenishing co-downregulated miR-100-5p and miR-125b-5p in malignant germ cell tumors causes growth inhibition through cell cycle disruption.

Marta Ferraresso, Shivani Bailey, Luz Alonso-Crisostomo, Dawn Ward, Christos Panayi, Zachary G L Scurlock, Harpreet K Saini, Stephen P Smith, James C Nicholson, Anton J Enright and 3 more

Abstract read
In one paragraph

Article in Molecular oncology, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Marta FerraressoDepartment of Pathology, University of Cambridge, UK.
Shivani BaileyDepartment of Pathology, University of Cambridge, UK.
Luz Alonso-CrisostomoDepartment of Pathology, University of Cambridge, UK.
Dawn WardDepartment of Pathology, University of Cambridge, UK.
Christos PanayiDepartment of Pathology, University of Cambridge, UK.
Zachary G L ScurlockDepartment of Pathology, University of Cambridge, UK.
Harpreet K SainiEMBL-European Bioinformatics Institute (EMBL-EBI), Cambridge, UK.
Stephen P SmithDepartment of Pathology, University of Cambridge, UK.
James C NicholsonDepartment of Paediatrics, University of Cambridge, Cambridge University Hospitals NHS Foundation Trust, UK.
Anton J EnrightDepartment of Pathology, University of Cambridge, UK.
Cinzia G ScarpiniDepartment of Pathology, University of Cambridge, UK.ORCID https://orcid.org/0000-0003-4730-5197
Nicholas ColemanDepartment of Pathology, University of Cambridge, UK.ORCID https://orcid.org/0000-0002-5374-739X
Matthew J MurrayDepartment of Pathology, University of Cambridge, UK.ORCID https://orcid.org/0000-0002-4480-1147

Funding

Cancer Research UKCCLGNIHR Cambridge Biomedical Research Centre NIHR203312St. Baldrick's Foundation 358099Waldmann Fund, Department of Pathology, University of Cambridge
6 · The paper itself

Abstract

MicroRNAs (miRNAs) are short, nonprotein-coding RNAs, and their expression is dysregulated in malignant germ cell tumors (GCTs). Here, we investigated the causes and consequences of downregulated miR-99a-5p/miR-100-5p (functionally identical) and miR-125b-5p levels in malignant GCTs regardless of age, site, or subtype. Quantitative RT-PCR was used to assess miR-99a-5p/miR-100-5p, miR-125b-5p, and associated gene expression in malignant GCT tissues/cell lines [seminoma (Sem), yolk sac tumor (YST), embryonal carcinoma (EC)]. Cells were treated with demethylating 5-azacytidine and pyrosequencing was performed. Combination miR-100-5p/miR-125b-5p mimic replenishment was used to treat malignant GCT cells. Global messenger RNA (mRNA) targets of the replenished miRNAs were identified and Metascape used to study pathway effects. We found that expression levels of miR-99a-5p/miR-100-5p and miR-125b-5p, their respective pri-miRNAs, and associated genes from chromosomes 11 and 21 (chr11/chr21) were downregulated and highly correlated in malignant GCT cells. Treatment with 5-azacytidine caused upregulation of these miRNAs, with pyrosequencing revealing hypermethylation of their chr11/chr21 loci, likely contributing to miR-100-5p/miR-125b-5p downregulation. Combination miR-100-5p/miR-125b-5p mimic replenishment resulted in growth inhibition in Sem/YST cells, with miR-100-5p/miR-125b-5p mRNA targets enriched in downregulated genes, which were involved in cell cycle (confirmed by flow cytometry) and signaling pathways. Knockdown of the miR-100-5p/miR-125b-5p target tripartite motif containing 71 (TRIM71kd) recapitulated miR-100-5p/miR-125b-5p replenishment, with growth inhibition and cell cycle disruption of Sem/YST/EC cells. Further, replenishment led to reduced lin-28 homolog A (LIN28A) levels and concomitant increases in let-7 (MIRLET7B) tumor suppressor miRNAs, creating a sustained reversion of cell phenotype. In summary, combination miR-100-5p/miR-125b-5p mimic replenishment or TRIM71kd caused growth inhibition in malignant GCT cells via cell cycle disruption. Further studies are now warranted, including mimic treatment alongside conventional platinum-based chemotherapy.

Indexed as

Cell CycleDown-RegulationMicroRNAsNeoplasms, Germ Cell and EmbryonalAzacitidineCell Line, TumorCell ProliferationGene Expression Regulation, NeoplasticHumansMaleAzacitidineMicroRNAsMIRN100 microRNA, humanMIRN125 microRNA, humangerm cell tumorin vitro modelsmethylationmicroRNAmRNAtestis

Identifiers

PMID39522951
PMCPMC11977657

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.