Evidence map›Paper›PMID 39519983›Full record

ArticlePlants (Basel, Switzerland)2024

Comparative Lipidomics Analysis Provides New Insights into the Metabolic Basis of Color Formation in Green Cotton Fiber.

Tongtong Li, Congcong Zheng, Jianfei Wu, Wei Xu, Tongdi Yan, Junchen Liu, Li Zhang, Zhengmin Tang, Yupeng Fan, Huihui Guo and 1 more

Abstract read
In one paragraph

Article in Plants (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Color-induced changes inFrontiers in plant science · 2024
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Tongtong LiState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.ORCID 0009-0002-7307-6201
Congcong ZhengState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.
Jianfei WuState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.ORCID 0009-0006-4191-3000
Wei XuState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.
Tongdi YanState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.
Junchen LiuState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.
Li ZhangState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.ORCID 0009-0004-1634-0832
Zhengmin TangState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.
Yupeng FanCollege of Life Sciences, Huaibei Normal University, Huaibei 235026, China.
Huihui GuoState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.ORCID 0009-0002-4772-7381
Fanchang ZengState Key Laboratory of Crop Biology, College of Agronomy, Shandong Agricultural University, Tai'an 271018, China.ORCID 0000-0001-8393-1174

Funding

Modern Agro-industry Technology Research System of Shandong Province SDAIT-03-02Taishan Scholar Talent Project from PRC tsqn202312154Young Elite Scientists Sponsorship Program by CAST 2022QNRC001
6 · The paper itself

Abstract

Green fiber (GF) is a naturally colored fiber. A limited understanding of its color formation mechanism restricts the improvement of colored cotton quality. This experiment used upland cotton green fiber germplasm 1-4560 and genetic inbred line TM-1; the lipid profiles of green fibers at 30 (white stage) and 35 days post-anthesis (DPA) (early greening stage), as well as those of TM-1 at the same stages, were revealed. Among the 109 differential types of lipids (DTLs) unique to GF, the content of phosphatidylserine PS (16:0_18:3) was significantly different at 30 and 35 DPA. It is speculated that this lipid is crucial for the pigment accumulation and color formation process of green fibers. The 197 DTLs unique to TM-1 may be involved in white fiber (WF) development. Among the shared DTLs in GF35 vs. GF30 and WF35 vs. WF30, sulfoquinovosyldiacyl-glycerol SQDG (18:1_18:1) displays a significant difference in the content change between green fibers and white fibers, potentially affecting color formation through changes in content. The enriched metabolic pathways in both comparison groups are relatively conserved. In the most significantly enriched glycerophospholipid metabolic pathway, 1-acyl-sn-glycero-3-phosphocholine (C04230) only appears in white cotton. This indicates differences in the metabolic pathways between white and green fibers, potentially related to different mechanisms of color formation and fiber development. These findings provide a new theoretical basis for studying cotton fiber development and offer important insights into the specific mechanism of green fiber color formation.

Indexed as

colored cottondifferential types of lipidsfiber color formationlipidomicsmetabolic pathway

Identifiers

PMID39519983
PMCPMC11548578

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.