Evidence map›Paper›PMID 39519398›Full record

ArticleInternational journal of molecular sciences2024

AI-Assisted Identification of Primary and Secondary Metabolomic Markers for Postoperative Delirium.

Vladimir A Ivanisenko, Artem D Rogachev, Aelita-Luiza A Makarova, Nikita V Basov, Evgeniy V Gaisler, Irina N Kuzmicheva, Pavel S Demenkov, Artur S Venzel, Timofey V Ivanisenko, Evgenia A Antropova and 5 more

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Review
  2. Article
  3. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Vladimir A IvanisenkoInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.ORCID 0000-0002-1859-4631
Artem D RogachevThe Artificial Intelligence Research Center of Novosibirsk State University, Novosibirsk 630090, Russia.ORCID 0000-0002-3338-8529
Aelita-Luiza A MakarovaInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.ORCID 0009-0005-1844-7921
Nikita V BasovThe Artificial Intelligence Research Center of Novosibirsk State University, Novosibirsk 630090, Russia.ORCID 0000-0001-6390-5796
Evgeniy V GaislerThe Artificial Intelligence Research Center of Novosibirsk State University, Novosibirsk 630090, Russia.
Irina N KuzmichevaThe Artificial Intelligence Research Center of Novosibirsk State University, Novosibirsk 630090, Russia.
Pavel S DemenkovInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.ORCID 0000-0001-9433-8341
Artur S VenzelInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.ORCID 0000-0002-7419-5168
Timofey V IvanisenkoInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.ORCID 0000-0002-0005-9155
Evgenia A AntropovaInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.
Nikolay A KolchanovInstitute of Cytology and Genetics, Siberian Branch of Russian Academy of Sciences (SB RAS), Novosibirsk 630090, Russia.
Victoria V PleskoE. Meshalkin National Medical Research Center, Novosibirsk 630055, Russia.
Gleb B MorozE. Meshalkin National Medical Research Center, Novosibirsk 630055, Russia.ORCID 0000-0002-0154-4662
Vladimir V LomivorotovE. Meshalkin National Medical Research Center, Novosibirsk 630055, Russia.ORCID 0000-0003-2399-563X
Andrey G PokrovskyV. Zelman Institute for the Medicine and Psychology, Novosibirsk State University, Novosibirsk 630090, Russia.

Funding

Analytical Center for the Government of the Russian Federation 70-2023-001318
6 · The paper itself

Abstract

Despite considerable investigative efforts, the molecular mechanisms of postoperative delirium (POD) remain unresolved. The present investigation employs innovative methodologies for identifying potential primary and secondary metabolic markers of POD by analyzing serum metabolomic profiles utilizing the genetic algorithm and artificial neural networks. The primary metabolomic markers constitute a combination of metabolites that optimally distinguish between POD and non-POD groups of patients. Our analysis revealed L-lactic acid, inositol, and methylcysteine as the most salient primary markers upon which the prediction accuracy of POD manifestation achieved AUC = 99%. The secondary metabolomic markers represent metabolites that exhibit perturbed correlational patterns within the POD group. We identified 54 metabolites as the secondary markers of POD, incorporating neurotransmitters such as gamma-aminobutyric acid (GABA) and serotonin. These findings imply a systemic disruption in metabolic processes in patients with POD. The deployment of gene network reconstruction techniques facilitated the postulation of hypotheses describing the role of established genomic POD markers in the molecular-genetic mechanisms of metabolic pathways dysregulation, and involving the identified primary and secondary metabolomic markers. This study not only expands the understanding of POD pathogenesis but also introduces a novel technology for the bioinformatic analysis of metabolomic data that could aid in uncovering potential primary and secondary markers in diverse research domains.

Indexed as

BiomarkersDeliriumMetabolomicsAgedArtificial IntelligenceFemaleHumansLactic AcidMaleMetabolomeMiddle AgedNeural Networks, ComputerPostoperative ComplicationsBiomarkersLactic Acidbiomarkersgene networksmetabolomicsneural networkspostoperative delirium

Identifiers

PMID39519398
PMCPMC11546914

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.