Evidence map›Paper›PMID 39519283›Full record

ArticleInternational journal of molecular sciences2024

Transcriptome and WGCNA Analyses Reveal Key Genes Regulating Anthocyanin Biosynthesis in Purple Sprout of Pak Choi (

Chaomin Xu, Hui Huang, Chen Tan, Liwei Gao, Shubei Wan, Bo Zhu, Daozong Chen, Bin Zhu

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
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  4. Genome-Wide Identification of thePlants (Basel, Switzerland) · 2025
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Chaomin XuSchool of Life Sciences, Guizhou Normal University, Guiyang 550025, China.
Hui HuangGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.
Chen TanGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.
Liwei GaoGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.
Shubei WanGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.
Bo ZhuGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.
Daozong ChenGanzhou Key Laboratory of Greenhouse Vegetable, College of Life Sciences, Gannan Normal University, Ganzhou 341000, China.ORCID 0000-0001-9920-5185
Bin ZhuSchool of Life Sciences, Guizhou Normal University, Guiyang 550025, China.

Funding

the Ganpo Talent Support Program of Jiangxi Province 20232BCJ23089the Key Research and Development Program of Jiangxi Province 20223BBF61002
6 · The paper itself

Abstract

Chinese cabbage is rich in vitamins, fibre, and nutrients and is one of the primary vegetables consumed in autumn and winter in South Asia. 'Purple pak choi' sprouts are particularly rich in anthocyanins and are favoured by consumers. However, reports on the regulation of anthocyanin synthesis in purple pak choi sprouts do not exist. In this study, we examined the phenotypic development of purple pak choi sprouts after germination. The total anthocyanin content increased from 0.02 to 0.52 mg/g FW from days 0 to 6. RNA-seq data analysis revealed an increase in differentially expressed genes corresponding to the development of purple pak choi sprouts. Expression pattern analysis of genes associated with the anthocyanin biosynthesis pathway revealed a significant upregulation of structural genes during the purple phase, suggesting that the transcription factors

Indexed as

AnthocyaninsBrassica rapaGene Expression Regulation, PlantPlant ProteinsTranscriptomeBiosynthetic PathwaysGene Expression ProfilingGene Regulatory NetworksGerminationPancreatitis-Associated ProteinsProtein Interaction MapsTranscription FactorsAnthocyaninsPancreatitis-Associated ProteinsPlant ProteinsREG3A protein, humanTranscription Factorsanthocyanin biosynthesisexpression patternRNA-seqsproutWGCNA

Identifiers

PMID39519283
PMCPMC11546107

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.