Evidence map›Paper›PMID 39519079›Full record

ArticleInternational journal of molecular sciences2024

Comparative Analysis of Commercial and Home-Made Media on RSPO1/S6R Axis in Organoids with Different Wnt Backgrounds: A Methodological Guide for the Selection of Intestinal Patient-Derived Organoids Culture Media.

Giulia Calafato, Chiara Alquati, Alice Bernardi, Floriana Jessica Di Paola, Luigi Ricciardiello

Abstract readComparative Study
In one paragraph

Article in International journal of molecular sciences, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Giulia CalafatoIRCCS Azienda Ospedaliero-Universitaria di Bologna, 40138 Bologna, Italy.ORCID 0000-0003-0177-238X
Chiara AlquatiDepartment of Medical and Surgical Sciences, University of Bologna, 40138 Bologna, Italy.
Alice BernardiDepartment of Medical and Surgical Sciences, University of Bologna, 40138 Bologna, Italy.
Floriana Jessica Di PaolaIRCCS Azienda Ospedaliero-Universitaria di Bologna, 40138 Bologna, Italy.ORCID 0000-0003-3110-3865
Luigi RicciardielloDepartment of Medical and Surgical Sciences, University of Bologna, 40138 Bologna, Italy.

Funding

The Italian Foundation for Cancer Research ETS 21723
6 · The paper itself

Abstract

WNT3A is an intestinal ligand triggering the Wnt/β-catenin (Wnt) pathway, which can be enhanced by R-spondin 1 (RSPO1) through the RSPO1-LGR axis or antagonized by the adenomatous polyposis coli (APC) protein supporting β-catenin-degradation. Wnt interplays with several pathways including PI3K/mTOR (mTOR). In this study, we evaluated the influence of WNT3A-commercial and home-made culture media and RSPO1 protein on the Wnt and mTOR interplay in non-APC and APC-mutated intestinal patient-derived organoids (PDOs). Normal mucosa (NM) of sporadic CRC and FAP PDOs were cultured with: WNT3A-lacking/containing commercial (A/A+B) or home-made (BASAL/WNT3A-conditioned medium (CM)±RSPO1) media. In non-APC-mutated-PDOs (CRC-NM), WNT3A-CM, over commercial A+B, strongly activated Wnt-target-genes

Indexed as

OrganoidsThrombospondinsWnt Signaling PathwayAdenomatous Polyposis ColiAdenomatous Polyposis Coli Proteinbeta CateninCulture MediaCulture Media, ConditionedHumansIntestinal MucosaR-SpondinsTOR Serine-Threonine KinasesWnt3A ProteinAdenomatous Polyposis Coli Proteinbeta CateninCulture MediaCulture Media, ConditionedMTOR protein, humanRSPO1 protein, humanR-SpondinsThrombospondinsTOR Serine-Threonine KinasesWnt3A ProteinWNT3A protein, humancolorectal cancer (CRC)intestinal patient-derived organoid (PDO)organoids culture mediaphospho-S6 ribosomal protein (p-S6R)R-spondin 1 (RSPO1)

Identifiers

PMID39519079
PMCPMC11546270

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.