Evidence map›Paper›PMID 39518365›Full record

ArticleDiagnostics (Basel, Switzerland)2024

Exploring IRGs as a Biomarker of Pulmonary Hypertension Using Multiple Machine Learning Algorithms.

Jiashu Yang, Siyu Chen, Ke Chen, Junyi Wu, Hui Yuan

Abstract read
In one paragraph

Article in Diagnostics (Basel, Switzerland), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jiashu YangDepartment of Clinical Laboratory Center, Beijing Anzhen Hospital, Capital Medical University, Beijing 100029, China.ORCID 0009-0003-3059-5068
Siyu ChenDepartment of Clinical Laboratory Center, Beijing Anzhen Hospital, Capital Medical University, Beijing 100029, China.
Ke ChenDepartment of Clinical Laboratory Center, Beijing Anzhen Hospital, Capital Medical University, Beijing 100029, China.
Junyi WuDepartment of Clinical Laboratory Center, Beijing Anzhen Hospital, Capital Medical University, Beijing 100029, China.
Hui YuanDepartment of Clinical Laboratory Center, Beijing Anzhen Hospital, Capital Medical University, Beijing 100029, China.

Funding

The National Key Research and Development Program 2022YFC2009600
6 · The paper itself

Abstract

backgroundPulmonary arterial hypertension (PAH) is a severe disease with poor prognosis and high mortality, lacking simple and sensitive diagnostic biomarkers in clinical practice. This study aims to identify novel diagnostic biomarkers for PAH using genomics research.

methodsWe conducted a comprehensive analysis of a large transcriptome dataset, including PAH and inflammatory response genes (IRGs), integrated with 113 machine learning models to assess diagnostic potential. We developed a clinical diagnostic model based on hub genes, evaluating their effectiveness through calibration curves, clinical decision curves, and ROC curves. An animal model of PAH was also established to validate hub gene expression patterns.

resultsAmong the 113 machine learning algorithms, the Lasso + LDA model achieved the highest AUC of 0.741. Differential expression profiles of hub genes CTGF, DDR2, FGFR2, MYH10, and YAP1 were observed between the PAH and normal control groups. A diagnostic model utilizing these hub genes was developed, showing high accuracy with an AUC of 0.87. MYH10 demonstrated the most favorable diagnostic performance with an AUC of 0.8. Animal experiments confirmed the differential expression of CTGF, DDR2, FGFR2, MYH10, and YAP1 between the PAH and control groups (

Indexed as

bioinformaticsbiomarkersdiagnosismachine learningpulmonary arterial hypertension

Identifiers

PMID39518365
PMCPMC11545203

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.