Evidence map›Paper›PMID 39516509›Full record

ArticleScientific reports2024

Sugar beet root susceptibility to storage rots and downregulation of plant defense genes increases with time in storage.

Shyam L Kandel, John D Eide, Andrea Firrincieli, Fernando L Finger, Abbas M Lafta, Karen K Fugate

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Shyam L KandelEdward T. Schafer Agricultural Research Center, Sugarbeet Research Unit, USDA-ARS, Fargo, ND, 58102, USA. Shyam.Kandel@usda.gov.
John D EideEdward T. Schafer Agricultural Research Center, Sugarbeet Research Unit, USDA-ARS, Fargo, ND, 58102, USA.
Andrea FirrincieliDepartment for Innovation in Biological, Agro-Food and Forest Systems, University of Tuscia, Viterbo, Italy.
Fernando L FingerDepartamento de Agronomia, Universidade Federal de Vicosa, 36570-900, Vicosa, MG, Brazil.
Abbas M LaftaDepartment of Plant Pathology, North Dakota State University, P.O. Box 6050, Fargo, ND, 58108, USA.
Karen K FugateEdward T. Schafer Agricultural Research Center, Sugarbeet Research Unit, USDA-ARS, Fargo, ND, 58102, USA.

Funding

U.S. Department of Agriculture, Agricultural Research Service Project Number: 3060-21000-045-000-D
6 · The paper itself

Abstract

Storage rots are a significant cause of postharvest losses for the sugar beet crop, however, intrinsic physiological and genetic factors that determine the susceptibility of roots to pathogen infection and disease development are unknown. Research, therefore, was carried out to evaluate the disease development in sugar beet roots caused by two common storage pathogens as a function of storage duration and storage temperature, and to identify changes in the expression of defense genes that may be influencing the root susceptibility to disease. To evaluate root susceptibility to disease, freshly harvested roots were inoculated with Botrytis cinerea or Penicillium vulpinum on the day of harvest or after 12, 40, or 120 d storage at 5 or 12 °C and the weight of rotted tissue present in the roots after incubation for 35 d after inoculation were determined. Disease susceptibility and progression to B. cinerea and P. vulpinum increased with storage duration with elevations in susceptibility occurring more rapidly to B. cinerea than P. vulpinum. Also, B. cinerea was more aggressive than P. vulpinum and caused greater rotting and tissue damage in postharvest sugar beet roots. Storage temperature had minimal effect on root susceptibility to these rot-causing pathogens. Changes in defense gene expression were determined by sequencing mRNA isolated from uninoculated roots that were similarly stored for 12, 40 or 120 d at 5 or 12 °C. As susceptibility to rot increased during storage, concurrent changes in defense-related gene expression were identified, including the differential expression of 425 pathogen receptor and 275 phytohormone signal transduction pathway-related genes. Furthermore, plant resistance and hormonal signaling genes that were significantly altered in expression coincident with the change in root susceptibility to storage rots were identified. Further investigation into the function of these genes may ultimately elucidate methods by which storage rot resistance in sugar beet roots may be improved in the future.

Indexed as

Beta vulgarisBotrytisGene Expression Regulation, PlantPlant DiseasesPlant RootsDisease ResistanceDown-RegulationPenicilliumPlant ProteinsPlant ProteinsBotrytisPathogen receptorPenicilliumPhytohormone signalingStorageSugar beet

Identifiers

PMID39516509
PMCPMC11549380

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.