Evidence map›Paper›PMID 39516474›Full record

ArticleNature communications2024

The genetic mechanism of B chromosome drive in rye illuminated by chromosome-scale assembly.

Jianyong Chen, Jan Bartoš, Anastassia Boudichevskaia, Anna Voigt, Mark Timothy Rabanus-Wallace, Steven Dreissig, Zuzana Tulpová, Hana Šimková, Jiří Macas, Gihwan Kim and 8 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 18 papers.

0numbers the graph read from it
0cells of the map it votes in
18citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

18 citing papers in PubMed.

  1. Article
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  5. Review
  6. Hybrid origin and phenotype evolution of the modern maize.Journal of integrative plant biology · 2026
    Review
  7. B chromosomes put the 'super' in supernumerary.Trends in genetics : TIG · 2026
    Review
  8. Article
  9. Article
  10. Review
  11. Article
  12. Article
  13. The enigma of the B chromosome-specific behaviour.Frontiers in plant science · 2026
    Review
  14. Article
  15. Article
  16. Article
  17. Review
  18. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

18 authors.

Jianyong ChenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. chenj@ipk-gatersleben.de.
Jan BartošInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of Plant Structural and Functional Genomics, Olomouc, Czech Republic.ORCID 0000-0002-4154-8895
Anastassia BoudichevskaiaLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0001-6285-9986
Anna VoigtLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Mark Timothy Rabanus-WallaceLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-4663-985X
Steven DreissigInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.
Zuzana TulpováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of Plant Structural and Functional Genomics, Olomouc, Czech Republic.ORCID 0000-0002-4403-9367
Hana ŠimkováInstitute of Experimental Botany of the Czech Academy of Sciences, Centre of Plant Structural and Functional Genomics, Olomouc, Czech Republic.ORCID 0000-0003-4159-7619
Jiří MacasBiology Centre, Czech Academy of Sciences, Ceske Budejovice, Czech Republic.ORCID 0000-0003-0829-1570
Gihwan KimLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-4621-1570
Jonas BuhlDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
Katharina BürstenbinderDepartment of Molecular Signal Processing, Leibniz Institute of Plant Biochemistry, Halle (Saale), Germany.
Frank R BlattnerLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0001-7731-7741
Jörg FuchsLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0003-4171-5371
Thomas SchmutzerInstitute of Agricultural and Nutritional Sciences, Martin Luther University Halle-Wittenberg, Halle (Saale), Germany.ORCID 0000-0003-1073-6719
Axel HimmelbachLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.
Veit SchubertLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany.ORCID 0000-0002-3072-0485
Andreas HoubenLeibniz Institute of Plant Genetics and Crop Plant Research (IPK) Gatersleben, Seeland, Germany. houben@ipk-gatersleben.de.ORCID 0000-0003-3419-239X

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) HO1779/30-1Deutsche Forschungsgemeinschaft (German Research Foundation) HO1779/30-2Deutsche Forschungsgemeinschaft (German Research Foundation) HO1779/34-1
6 · The paper itself

Abstract

The genomes of many plants, animals, and fungi frequently comprise dispensable B chromosomes that rely upon various chromosomal drive mechanisms to counteract the tendency of non-essential genetic elements to be purged over time. The B chromosome of rye - a model system for nearly a century - undergoes targeted nondisjunction during first pollen mitosis, favouring segregation into the generative nucleus, thus increasing their numbers over generations. However, the genetic mechanisms underlying this process are poorly understood. Here, using a newly-assembled, ~430 Mb-long rye B chromosome pseudomolecule, we identify five candidate genes whose role as trans-acting moderators of the chromosomal drive is supported by karyotyping, chromosome drive analysis and comparative RNA-seq. Among them, we identify DCR28, coding a microtubule-associated protein related to cell division, and detect this gene also in the B chromosome of Aegilops speltoides. The DCR28 gene family is neo-functionalised and serially-duplicated with 15 B chromosome-located copies that are uniquely highly expressed in the first pollen mitosis of rye.

Indexed as

Chromosomes, PlantMitosisSecaleAegilopsGene Expression Regulation, PlantGenes, PlantKaryotypingNondisjunction, GeneticPlant ProteinsPollenPlant Proteins

Identifiers

PMID39516474
PMCPMC11549084

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.