Evidence map›Paper›PMID 39516330›Full record

ArticleNPJ precision oncology2024

Multi-omics analysis of Prolyl 3-hydroxylase 1 as a prognostic biomarker for immune infiltration in ccRCC.

Guixin Ding, Tianqi Wang, Fengze Sun, Ming Liu, Gonglin Tang, Shengqiang Yu, Yongli Chu, Jian Ma, Yuanshan Cui, Gang Wu and 1 more

Abstract read
In one paragraph

Article in NPJ precision oncology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Guixin Ding *Department of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Tianqi Wang *Department of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Fengze Sun *Department of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Ming LiuDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Gonglin TangDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Shengqiang YuDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Yongli ChuDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Jian MaDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China.
Yuanshan CuiDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China. doctorcuiys@163.com.
Gang WuDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China. wugd1209@163.com.
Jitao WuDepartment of Urology, Yantai Yuhuangding Hospital, Qingdao University, Yantai, Shandong, China. wjturology@163.com.

Funding

National Natural Science Foundation of China (National Science Foundation of China) 82073131National Natural Science Foundation of China (National Science Foundation of China) 82370690Natural Science Foundation of Shandong Province (Shandong Provincial Natural Science Foundation) ZR2021MH203Natural Science Foundation of Shandong Province (Shandong Provincial Natural Science Foundation) ZR2023MH241Taishan Scholar Foundation of Shandong Province tsqn201909199Taishan Scholar Foundation of Shandong Province tsqn202306403
6 · The paper itself

Abstract

The formation of human collagen requires the presence of Prolyl 3-hydroxylase 1 (P3H1), but the regulatory mechanism of P3H1 remained insufficiently understood. Our study aimed to identify the role of P3H1 in clear cell renal cell carcinoma (ccRCC). P3H1 expression in ccRCC was validated using multiple databases and in vitro experiments. We performed a correlation analysis of P3H1 with drug sensitivity, immune checkpoints, and immune cell infiltration using transcriptome and single-cell sequencing. Drawing upon the Encyclopedia of RNA Interactomes database, we selected P3H1 as the focal point of our investigation, meticulously uncovering the intricate network of microRNAs and lncRNAs that potentially orchestrate ceRNA mechanisms. This study employs a multidimensional approach integrating vitro assays and multi-omics bioinformatics analyses to investigate P3H1's impact on ccRCC prognosis, immune modulation, immune checkpoints, ceRNA regulatory network, drug sensitivity, and therapeutic responses, aiming to uncover new insights into its therapeutic potential and inform future clinical strategies.

Identifiers

PMID39516330
PMCPMC11549470

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.