Evidence map›Paper›PMID 39514655›Full record

ArticleScience advances2024

Polygenic risk for alcohol use disorder affects cellular responses to ethanol exposure in a human microglial cell model.

Xindi Li, Jiayi Liu, Andrew J Boreland, Sneha Kapadia, Siwei Zhang, Alessandro C Stillitano, Yara Abbo, Lorraine Clark, Dongbing Lai, Yunlong Liu and 14 more

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

24 authors.

Xindi LiDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0009-0002-9027-6993
Jiayi LiuDepartment of Biochemistry and Molecular Biology, Rutgers, The State University of New Jersey, 604 Allison Road, Piscataway, NJ 08854, USA.ORCID 0000-0001-6432-0124
Andrew J BorelandDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0000-0002-1786-3473
Sneha KapadiaDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0009-0000-8573-6161
Siwei ZhangCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.ORCID 0000-0002-1646-063X
Alessandro C StillitanoDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0000-0003-3072-3667
Yara AbboDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0000-0003-3581-7582
Lorraine ClarkDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.
Dongbing LaiDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA.ORCID 0000-0001-7803-580X
Yunlong LiuDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA.ORCID 0000-0002-2699-626X
Peter B BarrDepartment of Psychiatry & Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, NY 11203, USA.ORCID 0000-0001-9321-657X
Jacquelyn L MeyersDepartment of Psychiatry & Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, NY 11203, USA.
Chella KamarajanDepartment of Psychiatry & Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, NY 11203, USA.ORCID 0000-0003-2291-6880
Weipeng KuangDepartment of Psychiatry & Behavioral Sciences, SUNY Downstate Health Sciences University, Brooklyn, NY 11203, USA.ORCID 0009-0008-2622-2556
Arpana AgrawalDepartment of Psychiatry, Washinton University School of Medicine, Saint Louis, MO 63108, USA.
Paul A SlesingerNash Family Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, NY, USA.ORCID 0000-0002-3868-7528
Danielle DickDepartment of Psychiatry, Rutgers University Robert Wood Johnson Medical School, Piscataway, NJ 08854, USA.ORCID 0000-0002-1636-893X
Jessica SalvatoreDepartment of Psychiatry, Rutgers University Robert Wood Johnson Medical School, Piscataway, NJ 08854, USA.ORCID 0000-0001-5504-5087
Jay TischfieldHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ 08854, USA.ORCID 0000-0003-3217-8287
Jubao DuanCenter for Psychiatric Genetics, NorthShore University HealthSystem, Evanston, IL 60201, USA.ORCID 0000-0002-7215-3220
Howard J EdenbergDepartment of Biochemistry and Molecular Biology, Indiana University School of Medicine, Indianapolis, IN, USA.
Anat KreimerDepartment of Biochemistry and Molecular Biology, Rutgers, The State University of New Jersey, 604 Allison Road, Piscataway, NJ 08854, USA.ORCID 0000-0002-3066-5498
Ronald P HartHuman Genetics Institute of New Jersey, Rutgers University, Piscataway, NJ 08854, USA.ORCID 0000-0003-4836-8712
Zhiping P PangDepartment of Neuroscience and Cell Biology and The Child Health Institute of New Jersey, Rutgers Robert Wood Johnson Medical School, New Brunswick, NJ 08901, USA.ORCID 0000-0002-6183-1233

Funding

Subject CollectionU10AA008401 · NIAAA · SUNY DOWNSTATE MEDICAL CENTER · PI JESSICA E SALVATORE · 1989 to 2026
$162.7M
Systematic Functional Interpretation of Regulatory Variants in SchizophreniaR01MH106575 · NIMH · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI DUAN, JUBAO · 2016 to 2025
$6.1M
UMDNJ TRAINING GRANT IN BIOTECHNOLOGYT32GM008339 · NIGMS · RUTGERS THE ST UNIV OF NJ NEW BRUNSWICK · PI YARMUSH, MARTIN L · 1989 to 2019
$6.1M
Deciphering the neural basis of alcohol use disorders using human and mouse neuronsR01AA023797 · NIAAA · RUTGERS BIOMEDICAL AND HEALTH SCIENCES · PI ZHIPING P. PANG · 2016 to 2026
$4.8M
Modeling Alzheimer's disease genetic variants in hiPSCR01AG063175 · NIA · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI DUAN, JUBAO, THINAKARAN, GOPAL · 2019 to 2023
$3.7M
Integrating epigenomics with DNA breathing dynamics for human non-coding disease variantsR01MH116281 · NIMH · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI ALEXANDROV, BOIAN STOIANOV, DUAN, JUBAO · 2019 to 2023
$3.0M
Neuronal Vulnerability to Lipid Droplets and Cholesterol in Alzheimer's DiseaseR01AG081374 · NIA · ENDEAVOR HEALTH CLINICAL OPERATIONS · PI Jubao Duan · 2023 to 2026
$2.7M
NRSA TrainingTL1TR003019 · NCATS · RUTGERS BIOMEDICAL/HEALTH SCIENCES-RBHS · PI SCOTTO, KATHLEEN W. · 2019 to 2023
$1.9M
NCATS NIH HHS TL1 TR003019NIAAA NIH HHS R01 AA023797NIAAA NIH HHS U10 AA008401NIA NIH HHS R01 AG063175NIA NIH HHS R01 AG081374NIGMS NIH HHS T32 GM008339NIMH NIH HHS R01 MH106575NIMH NIH HHS R01 MH116281
6 · The paper itself

Abstract

Polygenic risk scores (PRSs) assess genetic susceptibility to alcohol use disorder (AUD), yet their molecular implications remain underexplored. Neuroimmune interactions, particularly in microglia, are recognized as notable contributors to AUD pathophysiology. We investigated the interplay between AUD PRS and ethanol in human microglia derived from iPSCs from individuals with AUD high-PRS (diagnosed with AUD) or low-PRS (unaffected). Ethanol exposure induced elevated CD68 expression and morphological changes in microglia, with differential responses between high-PRS and low-PRS microglial cells. Transcriptomic analysis revealed expression differences in MHCII complex and phagocytosis-related genes following ethanol exposure; high-PRS microglial cells displayed enhanced phagocytosis and increased

Indexed as

AlcoholismEthanolGenetic Predisposition to DiseaseMicrogliaMultifactorial InheritanceCoculture TechniquesGene Expression ProfilingHumansInduced Pluripotent Stem CellsNeuronsPhagocytosisSynapsesEthanol

Identifiers

PMID39514655
PMCPMC11546823

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.