Evidence map›Paper›PMID 39514105›Full record

ArticleArchives of virology2024

Use of antibodies against Epstein-Barr virus nuclear antigen 1 for detection of cellular proteins with monomethylated arginine residues that are potentially involved in viral transformation.

Christian Graesser, Ruth Nord, Heinrich Flaswinkel, Elisabeth Kremmer, Eckart Meese, Karolina Magdalena Caban, Thomas Fröhlich, Friedrich A Grässer, Martin Hart

Abstract read
In one paragraph

Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Christian GraesserInstitute of Virology, Saarland University Medical School, Kirrbergerstraße, Haus 47, D-66421, Homburg/Saar, Germany.
Ruth NordInstitute of Virology, Saarland University Medical School, Kirrbergerstraße, Haus 47, D-66421, Homburg/Saar, Germany.
Heinrich FlaswinkelDepartment of Biology II, Ludwigs-Maximilians-Unversität (LMU) Munich, Butenandtstraße 1, 81377, Munich, Germany.
Elisabeth KremmerDepartment of Biology II, Ludwigs-Maximilians-Unversität (LMU) Munich, Butenandtstraße 1, 81377, Munich, Germany.
Eckart MeeseInstitute of Human Genetics, Saarland University (USAAR), Kirrbergerstraße, Haus 60, 66421, Homburg/Saar, Germany.
Karolina Magdalena CabanLaboratory for Functional Genome Analysis (LAFUGA), Gene Center, LMU Munich, Feodor-Lynen-Straße 25, 81377, Munich, Germany.
Thomas FröhlichLaboratory for Functional Genome Analysis (LAFUGA), Gene Center, LMU Munich, Feodor-Lynen-Straße 25, 81377, Munich, Germany.
Friedrich A GrässerInstitute of Virology, Saarland University Medical School, Kirrbergerstraße, Haus 47, D-66421, Homburg/Saar, Germany.
Martin HartCenter of Human and Molecular Biology (ZHMB), Institute of Human Genetics, Saarland University (USAAR), Kirrbergerstraße, Haus 60, Building 60, D-66421, Homburg/Saar, Germany. martin.hart@uks.eu.ORCID http://orcid.org/0000-0001-9361-8106

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Epstein-Barr virus nuclear antigen 1 (EBNA1) contains two arginine-glycine (RG) repeats that contain symmetric/asymmetric dimethylarginine (SDMA/ADMA) and monomethylarginine (MMA) residues. We generated mouse monoclonal antibodies directed against a monomethylated GRGRGG-containing repeat located between amino acids 328 and 377 of EBNA1. In addition to detecting MMA-modified EBNA1, we also had the goal of identifying cellular proteins that bind to MMA-modified EBNA1 in EBV-positive Raji cells. Furthermore, we hypothesized that antibodies against MMA-modified EBNA1 might also recognize cell factors that use an MMA-modified surface structure similar to that of EBNA1 to bind to their common targets. Using a combination of immunoprecipitation and mass spectrometry, we identified a number of such cellular proteins, including SNRPD1-3, ALY/REF, RPS15, DIDO1, LSM12, LSM14A, DAP3, and CPSF1. An NACA complex protein that was shown previously to bind to the glycine-alanine repeat of EBNA1 was also identified. The proteins identified in this study are involved in splicing, tumorigenesis, transcriptional activation, DNA stability, and RNA processing or export.

Indexed as

ArginineEpstein-Barr Virus Nuclear AntigensHerpesvirus 4, HumanAnimalsAntibodies, MonoclonalCell Transformation, ViralHumansMiceAntibodies, MonoclonalArginineEBV-encoded nuclear antigen 1Epstein-Barr Virus Nuclear Antigens

Identifiers

PMID39514105
PMCPMC11549202

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.