Evidence map›Paper›PMID 39513014›Full record

ArticlePlant direct2024

A strategy for identification and characterization of genic mutations using a temperature-sensitive chlorotic soybean mutant as an example.

C Nathan Hancock, Tetandianocee Germany, Priscilla Redd, Jack Timmons, Jeffery Lipford, Samantha Burns, Sergio Alan Cervantes-Perez, Marc Libault, Wenhao Shen, Yong-Qiang Charles An and 3 more

Abstract read
In one paragraph

Article in Plant direct, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

13 authors.

C Nathan HancockDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.ORCID https://orcid.org/0000-0002-0875-8495
Tetandianocee GermanyDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.
Priscilla ReddDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.
Jack TimmonsDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.
Jeffery LipfordDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.
Samantha BurnsDepartment of Biological, Ecological, and Earth Science University of South Carolina Aiken Aiken South Carolina USA.ORCID https://orcid.org/0009-0004-8473-4796
Sergio Alan Cervantes-PerezDepartment of Agronomy and Horticulture University of Nebraska-Lincoln Lincoln Nebraska USA.
Marc LibaultPlant Science and Technology University of Missouri Columbia Missouri USA.
Wenhao ShenDonald Danforth Plant Science Center St. Louis Missouri USA.
Yong-Qiang Charles AnUSDA-ARS Plant Genetics Research Unit Danforth Plant Science Center Saint Louis Missouri USA.
Lisa KanizayInstitute of Plant Breeding, Genetics & Genomics and Department of Crop and Soil Sciences University of Georgia Athens Georgia USA.ORCID https://orcid.org/0009-0001-6136-4209
Melinda YerkaInstitute of Plant Breeding, Genetics & Genomics and Department of Crop and Soil Sciences University of Georgia Athens Georgia USA.ORCID https://orcid.org/0000-0001-7210-8684
Wayne A ParrottInstitute of Plant Breeding, Genetics & Genomics and Department of Crop and Soil Sciences University of Georgia Athens Georgia USA.ORCID https://orcid.org/0000-0001-7847-1134

Funding

South Carolina IDeA Networks of Biomedical Research (SC INBRE V)P20GM103499 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI EDIE C GOLDSMITH · 2012 to 2026
$61.0M
NIGMS NIH HHS P20 GM103499
6 · The paper itself

Abstract

Screening a transposon-mutagenized soybean population led to the discovery of a recessively inherited chlorotic phenotype. This "y24" phenotype results in smaller stature, weaker stems, and a smaller root system. Genome sequencing identified 15 candidate genes with mutations likely to result in a loss of function. Amplicon sequencing of a segregating population was then used to narrow the list to a single candidate mutation, a single-base change in

Indexed as

chloroplastgenome resequencingmutationoxidoreductasevirescent

Identifiers

PMID39513014
PMCPMC11539004

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.