Evidence map›Paper›PMID 39512826›Full record

ArticleFrontiers in pharmacology2024

Multi-omics reveals the alleviating effect of berberine on ulcerative colitis through modulating the gut microbiome and bile acid metabolism in the gut-liver axis.

Jingsheng Yu, Yixuan Zheng, Changmin Liu, Zhuangyuan Xie, Qingqing Liu, Shuai Yang, Qianqian Tian, Chi Song, Shilin Chen

Abstract read
In one paragraph

Article in Frontiers in pharmacology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Jingsheng YuInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China.
Yixuan ZhengInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Changmin LiuInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Zhuangyuan XieInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Qingqing LiuInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Shuai YangInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Qianqian TianFaculty of Social Sciences, The University of Hong Kong, Hong Kong SAR, China.
Chi SongInstitute of Herbgenomics, Chengdu University of Traditional Chinese Medicine, Chengdu, China.
Shilin ChenInstitute of Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The dysfunction of gut microbiome and bile acid metabolism might cause the incidence and relapse of ulcerative colitis (UC). Thus, natural products have been considered effective for UC through the regulation of gut microbiome and bile acid. In this study, we evaluated the regulatory effect of berberine on gut microbiome and bile acid metabolism in UC. Results showed that the relative abundances of beneficial bacteria showed a decreasing trend in the UC model, and the taurine conjugated bile acids increased from the liver tissue to the colon tissue. Berberine inhibited the colonization of harmful bacteria and promoted the primary bile acid metabolism. Moreover, we used multi-omics technology (metagenomics, metabolomics, and transcriptomics technology) to reveal that berberine restored the intestinal barrier function through bile acid/S1PR2/RhoA/ROCK pathway. The result of transmission electron microscopy directly showed that the damaged intestinal mucosal barrier was repaired through the berberine treatment. This study revealed the treatment influence on UC through multi-omics technology

Indexed as

berberinebile acidgut microbiomeintestinal barriers1pr2ulcerative colitis

Identifiers

PMID39512826
PMCPMC11540792

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.