Evidence map›Paper›PMID 39512337›Full record

ArticleFrontiers in immunology2024

A distinct immune landscape in anti-synthetase syndrome profiled by a single-cell genomic study.

Jiayu Ding, Yanmei Li, Zhiqin Wang, Feng Han, Ming Chen, Jun Du, Tong Yang, Mei Zhang, Yingai Wang, Jing Xu and 10 more

Abstract read
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
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  4. Review
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  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

20 authors.

Jiayu DingThe Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Department of Pharmacology, School of Basic Medical Science, Tianjin Medical University, Tianjin, China.
Yanmei LiDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Zhiqin WangThe Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Department of Pharmacology, School of Basic Medical Science, Tianjin Medical University, Tianjin, China.
Feng HanDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Ming ChenDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Jun DuDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Tong YangDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Mei ZhangDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Yingai WangDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Jing XuDepartment of Neurology, Tianjin Medical University General Hospital, Tianjin, China.
Gaoya WangDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Yong XuDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Xiuhua WuDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Jian HaoDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Xinlei LiuDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Guangxin ZhangDepartment of Research and Development, Seekgene Biotechnology Co, Ltd, Beijing, China.
Na ZhangDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Wenwen SunDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.
Zhigang CaiThe Province and Ministry Co-sponsored Collaborative Innovation Center for Medical Epigenetics, Department of Pharmacology, School of Basic Medical Science, Tianjin Medical University, Tianjin, China.
Wei WeiDepartment of Rheumatology and Immunology, Tianjin Medical University General Hospital, Tianjin, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Objectives: The objective of this study was to profile the transcriptional profiles of peripheral blood mononuclear cells (PBMCs) and their immune repertoires affected by anti-synthetase syndrome (ASS) at the single-cell level. Methods: We performed single-cell RNA sequencing (scRNA-seq) analysis of PBMCs and bulk RNA sequencing for patients with ASS (N=3) and patients with anti-melanoma differentiation-associated gene 5-positive dermatomyositis (MDA5 Results: After meticulous annotation of PBMCs, we noticed a significant decrease in the proportion of mucosal-associated invariant T (MAIT) cells in ASS patients compared to HCs, while there was a notable increase in the proportion of proliferative NKT cells. Compared with MDA5 Conclusion: Using single-cell genomic datasets of ASS PBMCs, we revealed a distinctive profile in the immune system of individuals with ASS, compared to that with MDA5

Indexed as

Leukocytes, MononuclearMyositisSingle-Cell AnalysisAdultDermatomyositisFemaleGene Expression ProfilingGenomicsHumansInterferon-Induced Helicase, IFIH1MaleMiddle AgedTranscriptomeInterferon-Induced Helicase, IFIH1anti-synthetase syndrome (ASS)auto-immune diseasesIFN-IImucosal-associated invariant T (MAIT) cellsingle-cell RNA sequencing (scRNA-seq)

Identifiers

PMID39512337
PMCPMC11540782

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.