Evidence map›Paper›PMID 39511732›Full record

ArticleAnalytical chemistry2024

Enhanced Payload Localization in Antibody-Drug Conjugates Using a Middle-Down Mass Spectrometry Approach with Proton Transfer Charge Reduction.

Linda B Lieu, Cynthia Nagy, Jingjing Huang, Christopher Mullen, Graeme C McAlister, Vlad Zabrouskov, Kristina Srzentić, Kenneth R Durbin, Rafael D Melani, Luca Fornelli

Abstract read
In one paragraph

Article in Analytical chemistry, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. Article
  5. Review
  6. Article
  7. Top-Down and Middle-Down Mass Spectrometry of Antibodies.Molecular & cellular proteomics : MCP · 2025
    Review
  8. The Proteoform Landscape of Tau from the Human Brain.Journal of proteome research · 2025
    Article
  9. Article
  10. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Linda B LieuUniversity of Oklahoma, Department of Chemistry and Biochemistry, 101 Stephenson Parkway, Norman, Oklahoma 73109, United States.
Cynthia NagyUniversity of Oklahoma, School of Biological Sciences, 730 Van Vleet Oval, Norman, Oklahoma 73109, United States.
Jingjing HuangThermo Fisher Scientific, 355 River Oaks pkwy, San Jose, California 35134, United States.
Christopher MullenThermo Fisher Scientific, 355 River Oaks pkwy, San Jose, California 35134, United States.
Graeme C McAlisterThermo Fisher Scientific, 355 River Oaks pkwy, San Jose, California 35134, United States.
Vlad ZabrouskovThermo Fisher Scientific, 355 River Oaks pkwy, San Jose, California 35134, United States.ORCID 0000-0003-3567-9407
Kristina SrzentićThermo Fisher Scientific, 11 Neuhofstrasse, 4153 Reinach, Switzerland.
Kenneth R DurbinProteinaceous, Inc, Evanston, Illinois 60626, United States.ORCID 0000-0001-7163-4877
Rafael D MelaniThermo Fisher Scientific, 355 River Oaks pkwy, San Jose, California 35134, United States.
Luca FornelliUniversity of Oklahoma, Department of Chemistry and Biochemistry, 101 Stephenson Parkway, Norman, Oklahoma 73109, United States.ORCID 0000-0001-6334-1046

Funding

A multi-level mass spectrometry pipeline for the analysis of whole proteoforms and their complexesR35GM147397 · NIGMS · UNIVERSITY OF OKLAHOMA · PI Luca Fornelli · 2022 to 2026
$1.9M
NIGMS NIH HHS R35 GM147397
6 · The paper itself

Abstract

Antibody-drug conjugates (ADCs) represent a novel class of immunoconjugates with growing therapeutic relevance, since they combine the efficacy of cytotoxic drugs with the specificity of antibodies. However, by design, ADCs introduce structural features into the monoclonal antibody scaffold that complicate their analysis. Payload attachment to cysteine or lysine residues can often result in product heterogeneity, regarding both the number of attached drug molecules and their conjugation site, necessitating the use of state-of-the-art MS instrumentation to elucidate their complexity. In middle-down mass spectrometry (MD MS), the gas-phase sequencing of ∼25 kDa ADC subunits with different ion activation techniques generally produces rich fragmentation mass spectra; however, spectral congestion can cause some fragment ions to go undetected, including those that can pinpoint the exact location of payload conjugation sites. Proton transfer charge reduction (PTCR) can substantially simplify fragment ion spectra, thereby unveiling the presence of product ions whose signals were previously suppressed. Herein, we present an MD MS strategy relying on the use of PTCR to investigate a cysteine-based ADC mimic with a variable drug-to-antibody ratio, targeting the unambiguous localization of payload conjugation sites. Unlike traditional tandem MS experiments (MS

Indexed as

ImmunoconjugatesMass SpectrometryProtonsAntibodies, MonoclonalCysteineHumansAntibodies, MonoclonalCysteineImmunoconjugatesProtons

Identifiers

PMID39511732
PMCPMC11892948

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.