Evidence map›Paper›PMID 39511617›Full record

ArticleBMC medical genomics2024

Co-regulated ceRNA network mediated by circRNA and lncRNA in patients with gouty arthritis.

Yanqiu Xu, Jiayu Tian, Miao Wang, Jinkun Liu, Wenfu Cao, Bin Wu

Abstract read
In one paragraph

Article in BMC medical genomics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yanqiu Xu *College of Traditional Chinese Medicine, Chongqing Medical University, Chongqing, 400016, People's Republic of China.
Jiayu Tian *Department of Rheumatology, Chongqing Hospital of Traditional Chinese Medicine, Chongqing, 400021, People's Republic of China.
Miao Wang *Department of Rheumatology, Chongqing Hospital of Traditional Chinese Medicine, Chongqing, 400021, People's Republic of China.
Jinkun Liu *Department of Rheumatology, Chongqing Hospital of Traditional Chinese Medicine, Chongqing, 400021, People's Republic of China.
Wenfu Cao *College of Traditional Chinese Medicine, Chongqing Medical University, Chongqing, 400016, People's Republic of China. caowenfu20220401@163.com.
Bin Wu *College of Traditional Chinese Medicine, Chongqing Medical University, Chongqing, 400016, People's Republic of China. wuubinn@126.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Numerous studies have demonstrated the involvement of messenger RNAs (mRNAs) and non-coding RNAs, including long non-coding RNAs (lncRNA), circular RNAs (circRNAs) and microRNA (miRNAs), in gouty arthritis onset; however, the regulatory mechanism has not yet been elucidated. Here, we applied whole-transcriptome sequencing to identify the differentially expressed circRNAs, lncRNAs, miRNAs and mRNAs between the gout patients and normal people, and constructed co-regulated networks of circRNAs and lncRNAs according to the competitive endogenous RNA (ceRNA) theory for gouty arthritis onset to improve our understanding of the pathogenesis of this disease. The most significant finding of this study is the co-regulated ceRNA network of circRNAs and lncRNAs in gouty arthritis. The circRNA novel_circ_0030384 and the lncRNAs AAMP, TRIM16, PKN1, XLOC_184579 and XLOC_189826 were upstream genes in the co-regulated network. These upstream genes upregulated miR550a-5p and miR550a-3-5p, which downregulated PSME1 and FERMT3 expression. These mRNAs participated in proteasome dynamics, antigen processing and presentation, and platelet activation, which are associated with inflammation in gouty arthritis. In addition, the circRNA and lncRNAs upregulated miR550a-5p, which downregulated GRK2 and OS9 expression. Also, it proved that the down-regulated of PSME1, FERMT3, GRK2 and OS9 can aggravate gouty arthritis in vitro. In summary, these genes mediate inflammation in gouty arthritis through chemokine signaling to regulate neutrophil function.

Indexed as

Arthritis, GoutyGene Regulatory NetworksRNA, CircularRNA, Long NoncodingCase-Control StudiesGene Expression RegulationHumansMaleMicroRNAsRNA, Competitive EndogenousRNA, MessengerMicroRNAsRNA, CircularRNA, Competitive EndogenousRNA, Long NoncodingRNA, MessengerCircular RNACompetitive endogenous RNA networkCo-regulated networkGouty arthritisLong non-coding RNARNA sequencing

Identifiers

PMID39511617
PMCPMC11545282

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.