Evidence map›Paper›PMID 39511334›Full record

ArticleScientific reports2024

Protein-RNA interaction dynamics reveal key regulators of oncogenic KRAS-driven cancers.

Ka-Yun Ban, Yong-Woo Na, Juhan Song, Jong-Seo Kim, Jimi Kim

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Ka-Yun BanDepartment of Health Science and Technology, Lee Gil Ya Cancer and Diabetes Institute, GAIHST, Incheon, 21999, Republic of Korea.
Yong-Woo NaSchool of Biological Sciences, Seoul National University, Seoul, 08826, Korea.
Juhan SongDepartment of Health Science and Technology, Lee Gil Ya Cancer and Diabetes Institute, GAIHST, Incheon, 21999, Republic of Korea.
Jong-Seo KimSchool of Biological Sciences, Seoul National University, Seoul, 08826, Korea.
Jimi KimDepartment of Health Science and Technology, Lee Gil Ya Cancer and Diabetes Institute, GAIHST, Incheon, 21999, Republic of Korea. zimic@gachon.ac.kr.

Funding

the National Research Foundation of Korea grant NRF-2022R1C1C2003822the National Research Foundation of Korea grant NRF-RS-2023-0025229112982076870001
6 · The paper itself

Abstract

KRAS is one of the most frequently mutated oncogenes across various cancers. Oncogenic KRAS mutations rewire cellular signaling, leading to significant alterations in gene expression. RNA-binding proteins (RBPs) play a pivotal role in gene expression regulation by post-transcriptionally controlling various aspects of RNA metabolism. It has become clear that interactions between RBPs and RNA are frequently dysregulated in numerous cancers. However, how oncogenic KRAS mutations reshape the post-transcriptional regulatory network mediated by RBPs remains poorly understood. In this study, we systematically dissected oncogenic KRAS-driven alterations of RNA-RBP networks. We identified 35 cancer-associated RBPs with either increased or decreased RNA binding upon oncogenic KRAS activation, including PDCD11, which is essential for the viability of KRAS mutant cancers, and ELAVL2, which regulates cell migration in KRAS mutant lung cancers. Our study serves as a crucial resource for elucidating RBP regulatory networks in KRAS mutant cancers and may provide new avenues for therapeutic strategies targeting KRAS mutant malignancies.

Indexed as

Gene Expression Regulation, NeoplasticMutationNeoplasmsProto-Oncogene Proteins p21(ras)RNA-Binding ProteinsCell Line, TumorGene Regulatory NetworksHumansProtein BindingRNAKRAS protein, humanProto-Oncogene Proteins p21(ras)RNARNA-Binding Proteins

Identifiers

PMID39511334
PMCPMC11544019

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.