ArticleNature communications2024
Phylotranscriptomics reveals the phylogeny of Asparagales and the evolution of allium flavor biosynthesis.
Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.
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Who cites it
5 citing papers in PubMed.
- Domestication and genome evolution iniScience · 2026Review
- Phylogenetic relationships and divergent evolution in Pueraria sensu stricto (Fabaceae) based on plastid genomes and nrITS sequences.BMC plant biology · 2025Article
- Nuclear phylogeny of Malus with increased sampling provides new insights into biogeography and character evolution.BMC plant biology · 2025Article
- Biosilicification in monocots: Comparative analysis highlights contrasting patterns of deposition.American journal of botany · 2025Article
- Persistent Habitat Instability and Patchiness, Sexual Attraction, Founder Events, Drift and Selection: A Recipe for Rapid Diversification of Orchids.Plants (Basel, Switzerland) · 2025Review
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Authors and funding
13 authors.
Funding
Abstract
Asparagales, the largest monocot order, is renowned for its ecological, economic, and medicinal significance. Here, we leverage transcriptome data from 455 Asparagales species to explore the phylogeny of Asparagales. Moreover, we investigate the evolutionary patterns of the genes involved in allium flavor formation. We not only establish a robust bifurcating phylogeny of Asparagales but also explore their reticulate relationships. Notably, we find that eight genes involved in the biosynthesis of allium flavor compounds underwent expansion in Allium species. Furthermore, we observe Allium-specific mutations in one amino acid within alliinase and three within lachrymatory factor synthase. Overall, our findings highlight the role of gene expansion, increased expression, and amino acid mutations in driving the evolution of Allium-specific compounds. These insights not only deepen our understanding of the phylogeny of Asparagales but also illuminate the genetic mechanisms underpinning specialized compounds.
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