Evidence map›Paper›PMID 39509462›Full record

ArticlePLoS genetics2024

Repeat mediated excision of gene drive elements for restoring wild-type populations.

Pratima R Chennuri, Josef Zapletal, Raquel D Monfardini, Martial Loth Ndeffo-Mbah, Zach N Adelman, Kevin M Myles

Abstract read
In one paragraph

Article in PLoS genetics, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors.

Pratima R ChennuriDepartment of Entomology and AgriLife Research, Texas A&M University, College Station, Texas, United States of America.ORCID https://orcid.org/0000-0002-6737-7051
Josef ZapletalDepartment of Industrial and Systems Engineering, Texas A&M University, College Station, Texas, United States of America.ORCID https://orcid.org/0000-0002-5569-5239
Raquel D MonfardiniDepartment of Entomology and AgriLife Research, Texas A&M University, College Station, Texas, United States of America.ORCID https://orcid.org/0000-0003-0922-8944
Martial Loth Ndeffo-MbahDepartment of Veterinary Integrative Biosciences, Texas A&M University, College Station, Texas, United States of America.
Zach N AdelmanDepartment of Entomology and AgriLife Research, Texas A&M University, College Station, Texas, United States of America.ORCID https://orcid.org/0000-0001-5901-7171
Kevin M MylesDepartment of Entomology and AgriLife Research, Texas A&M University, College Station, Texas, United States of America.ORCID https://orcid.org/0000-0002-9820-2502

Funding

Self-Eliminating Strategy To Control Gene DriveR01AI148787 · NIAID · TEXAS A&M AGRILIFE RESEARCH · PI Zach N. Adelman, KEVIN M MYLES · 2020 to 2026
$4.4M
Hierarchical antiviral immunity in disease vector mosquitoesR01AI119081 · NIAID · VIRGINIA POLYTECHNIC INST AND ST UNIV · PI MYLES, KEVIN M · 2015 to 2019
$1.9M
NIAID NIH HHS R01 AI119081NIAID NIH HHS R01 AI148787
6 · The paper itself

Abstract

Here, we demonstrate that single strand annealing (SSA) can be co-opted for the precise autocatalytic excision of a drive element. We have termed this technology Repeat Mediated Excision of a Drive Element (ReMEDE). By engineering direct repeats flanking the drive allele and inducing a double-strand DNA break (DSB) at a second endonuclease target site within the allele, we increased the utilization of SSA repair. ReMEDE was incorporated into the mutagenic chain reaction (MCR) gene drive targeting the yellow gene of Drosophila melanogaster, successfully replacing drive alleles with wild-type alleles. Sequencing across the Cas9 target site confirmed transgene excision by SSA after pair-mated outcrosses with yReMEDE females, revealing ~4% inheritance of an engineered silent TcG marker sequence. However, phenotypically wild-type flies with alleles of indeterminate biogenesis also were observed, retaining the TGG sequence (~16%) or harboring a silent gGG mutation (~0.5%) at the PAM site. Additionally, ~14% of alleles in the F2 flies were intact or uncut paternally inherited alleles, indicating limited maternal deposition of Cas9 RNP. Although ReMEDE requires further research and development, the technology has some promising features as a gene drive mitigation strategy, notably its potential to restore wild-type populations without additional transgenic releases or large-scale environmental modifications.

Indexed as

AllelesDrosophila melanogasterGene Drive TechnologyAnimalsAnimals, Genetically ModifiedCRISPR-Cas SystemsDNA Breaks, Double-StrandedDrosophila ProteinsFemaleGene EditingMaleTransgenesDrosophila Proteins

Identifiers

PMID39509462
PMCPMC11584131

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.