Evidence map›Paper›PMID 39507245›Full record

ArticleiScience2024

Assessing mechanical agency during apical apoptotic cell extrusion.

Sommer Anjum, Llaran Turner, Youmna Atieh, George T Eisenhoffer, Lance A Davidson

Abstract read
In one paragraph

Article in iScience, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Shape, Strain, and Stability: Epithelia Under High Strain.bioRxiv : the preprint server for biology · 2025
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Sommer AnjumDepartment of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15260, USA.
Llaran TurnerDepartment of Genetics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Youmna AtiehDepartment of Genetics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
George T EisenhofferDepartment of Genetics, University of Texas MD Anderson Cancer Center, Houston, TX 77030, USA.
Lance A DavidsonDepartment of Bioengineering, University of Pittsburgh, Pittsburgh, PA 15260, USA.

Funding

Training in Biomechanics in Regenerative MedicineT32EB003392 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI WOO, SAVIO L-Y. · 2005 to 2020
$4.0M
The Biomechanics of morphogenesis in the frogR01HD044750 · NICHD · UNIVERSITY OF VIRGINIA CHARLOTTESVILLE · PI DAVIDSON, LANCE A. · 2005 to 2020
$3.8M
Biomechanics of MorphogenesisR37HD044750 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI LANCE A. DAVIDSON · 2022 to 2026
$2.1M
Regulation of Cell Turnover During Epithelial Tissue HomeostasisR01GM124043 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI EISENHOFFER, GEORGE THOMAS · 2018 to 2022
$2.0M
Regulation of Overall Cell Numbers During Epithelial Tissue Homeostasis and PathogenesisR35GM149226 · NIGMS · UNIVERSITY OF TX MD ANDERSON CAN CTR · PI George Thomas Eisenhoffer · 2023 to 2026
$1.7M
Biomechanics in Regenerative Medicine (BiRM) Training ProgramT32EB034216 · NIBIB · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI David Alan Vorp · 2023 to 2026
$855k
Engineering the OrganizerR21HD106629 · NICHD · UNIVERSITY OF PITTSBURGH AT PITTSBURGH · PI DAVIDSON, LANCE A. · 2021 to 2022
$415k
NIBIB NIH HHS T32 EB003392NIBIB NIH HHS T32 EB034216NICHD NIH HHS R01 HD044750NICHD NIH HHS R21 HD106629NICHD NIH HHS R37 HD044750NIGMS NIH HHS R01 GM124043NIGMS NIH HHS R35 GM149226
6 · The paper itself

Abstract

Homeostasis is necessary for epithelia to maintain barrier function and prevent the accumulation of defective cells. Unfit, excess, and dying cells in the larval zebrafish tail fin epidermis are removed via controlled cell death and extrusion. Extrusion coincides with oscillations of cell area, both in the extruding cell and its neighbors. Here, we develop a biophysical model of this process to explore the role of autonomous and non-autonomous mechanics. We vary biophysical properties and oscillatory behaviors of extruding cells and their neighbors along with tissue-wide cell density and viscosity. We find that cell autonomous processes are major contributors to the dynamics of extrusion, with the mechanical microenvironment providing a less pronounced contribution. We also find that some cells initially resist extrusion, influencing the duration of the expulsion process. Our model provides insights into the cellular dynamics and mechanics that promote elimination of unwanted cells from epithelia during homeostatic tissue maintenance.

Indexed as

BioinformaticsBiophysicsCell biology

Identifiers

PMID39507245
PMCPMC11539584

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.