Evidence map›Paper›PMID 39507103›Full record

ArticleJournal of the American Statistical Association2024

Covariate-Assisted Bayesian Graph Learning for Heterogeneous Data.

Yabo Niu, Yang Ni, Debdeep Pati, Bani K Mallick

Abstract read
In one paragraph

Article in Journal of the American Statistical Association, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yabo NiuDepartment of Mathematics, University of Houston.
Yang NiDepartment of Statistics, Texas A&M University.
Debdeep PatiDepartment of Statistics, Texas A&M University.
Bani K MallickDepartment of Statistics, Texas A&M University.

Funding

Sex influences on periodontal disease and diabetes: A population science approach, with softwareR01DE031134 · NIDCR · VIRGINIA COMMONWEALTH UNIVERSITY · PI BANDYOPADHYAY, DIPANKAR, PATI, DEBDEEP · 2022 to 2025
$2.1M
Bayesian Differential Causal Network and Clustering Methods for Single-Cell Data (R01GM148974)R01GM148974 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI NI, YANG · 2022 to 2025
$1.2M
NIDCR NIH HHS R01 DE031134NIGMS NIH HHS R01 GM148974
6 · The paper itself

Abstract

In a traditional Gaussian graphical model, data homogeneity is routinely assumed with no extra variables affecting the conditional independence. In modern genomic datasets, there is an abundance of auxiliary information, which often gets under-utilized in determining the joint dependency structure. In this article, we consider a Bayesian approach to model undirected graphs underlying heterogeneous multivariate observations with additional assistance from covariates. Building on product partition models, we propose a novel covariate-dependent Gaussian graphical model that allows graphs to vary with covariates so that observations whose covariates are similar share a similar undirected graph. To efficiently embed Gaussian graphical models into our proposed framework, we explore both Gaussian likelihood and pseudo-likelihood functions. For Gaussian likelihood, a G-Wishart distribution is used as a natural conjugate prior, and for the pseudo-likelihood, a product of Gaussianconditionals is used. Moreover, the proposed model has large prior support and is flexible to approximate any

Indexed as

Gaussian graphical modelG-Wishart priorposterior contraction rateProduct partition modelpseudo-likelihood

Identifiers

PMID39507103
PMCPMC11536292

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.