Evidence map›Paper›PMID 39506937›Full record

ArticleHeliyon2024

Integrative genomic analysis of RNA-modification-single nucleotide polymorphisms associated with kidney function.

Xinran Liu, Sai Zhu, Xueqi Liu, Xiaomei Luo, Chaoyi Chen, Ling Jiang, Yonggui Wu

Abstract read
In one paragraph

Article in Heliyon, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

7 authors.

Xinran LiuDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Sai ZhuDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Xueqi LiuDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Xiaomei LuoDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Chaoyi ChenDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Ling JiangDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.
Yonggui WuDepartment of Nephropathy, The First Affiliated Hospital of Anhui Medical University, Hefei, Anhui, 230022, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Increasing evidence suggests that RNA modification plays a significant role in the kidney and may be an ideal target for the treatment of kidney diseases. However, the specific mechanisms underlying RNA modifications in the pathogenesis of kidney disease remain unclear. Genome-wide association studies (GWAS) have identified numerous genetic loci involved in kidney function and RNA modifications. The identification and exploration of RNA modification-related single-nucleotide polymorphisms (RNAm-SNPs) associated with kidney function can help us to comprehensively understand the underlying mechanism of kidney disease and identify potential therapeutic targets. Methods: First, we examined the association of RNAm-SNPs with eGFR. Second, we performed expression quantitative trait locus (eQTL) and protein quantitative trait locus (pQTL) analyses to explore the functions of the identified RNAm-SNPs. Finally, we evaluated the causality between RNAm-SNP-associated gene expression and circulating proteins and kidney function using a Mendelian randomization (MR) analysis. Results: A total of 252 RNA m-SNPs related to m Conclusions: This study reveals an association between RNAm-SNPs and kidney function. These SNPs regulate gene expression and protein levels through RNA modifications, eventually leading to kidney dysfunction. Our study provides novel insights that connect the genetic risk of kidney disease to RNA modification and suggests potential therapeutic targets for the prevention and treatment of kidney disease.

Indexed as

Genome-wide association studyKidney functionMendelian randomizationRNA modification

Identifiers

PMID39506937
PMCPMC11538735

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.