Evidence map›Paper›PMID 39506798›Full record

ArticleJournal of orthopaedic surgery and research2024

CRISPR activation identifies a novel miR-2861 binding site that facilitates the osteogenesis of human mesenchymal stem cells.

Seong-Ho Park, Jungwoo Kim, Hee-Jin Yang, Ju Yeon Lee, Chi Heon Kim, Junho K Hur, Sung Bae Park

Erratum issuedAbstract read
In one paragraph

Article in Journal of orthopaedic surgery and research, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

7 authors.

Seong-Ho ParkDepartment of Medicine, Major in Medical Genetics, Graduate School, Hanyang University, Seoul, Korea.
Jungwoo KimDepartment of Neurosurgery, Seoul National University Boramae Medical Center, 20 Boramae-ro 5-gil, Dongjak-gu, Seoul, 07061, Korea.
Hee-Jin YangDepartment of Neurosurgery, Seoul National University Boramae Medical Center, 20 Boramae-ro 5-gil, Dongjak-gu, Seoul, 07061, Korea.
Ju Yeon LeeHanyang Institute of Bioscience and Biotechnology, Hanyang University, Seoul, Korea.
Chi Heon KimDepartment of Neurosurgery, Seoul National University College of Medicine, Seoul, Korea.
Junho K HurHanyang Institute of Bioscience and Biotechnology, Hanyang University, Seoul, Korea. juhur@hanyang.ac.kr.
Sung Bae ParkDepartment of Neurosurgery, Seoul National University Boramae Medical Center, 20 Boramae-ro 5-gil, Dongjak-gu, Seoul, 07061, Korea. ddolbae01@naver.com.

Funding

National Research Foundation of Korea (NRF) funded by the Korean Ministry of Education, Science, and Technology 2021M3A9I4024452, 2020R1I1A2075393, and HI22C063600
6 · The paper itself

Abstract

We investigated the regulation of histone deacetylases (HDACs) by miR-2861 in the osteoblastic differentiation of human mesenchymal stem cells (MSCs) and miR-2861 binding site by CRISPR activation (CRISPRa). Transfection of miR-2861 into human MSCs was performed and the effect on osteoblast differentiation was analyzed. Using catalytically inactive Cas12a, the CRISPRa system induced targeted overexpression of endogenous miRNA and repressed the luciferase activities of reporters that contained functional miRNA target sites. The delivery of miR-2861 into MSCs enhanced osteoblast differentiation by decreased expressions of the HDAC1, 4 and 5 genes. The mechanism of HDAC5 repression by miR-2861 in humans has not been fully elucidated. To this end, the HDAC5 mRNA sequence was analyzed and a putative primate-specific miR-2861 binding site was identified in the 3' untranslated region (3'-UTR). CRISPRa was applied to validate the putative binding site and an increase in endogenous miR-2861 was found to repress the expression of a reporter that contained the novel miR-2861 binding site. The delivery of miR-2861 to human MSCs enhanced osteoblast differentiation. In the 3'-UTR, the HDAC5 repression was mediated by the miR-2861 binding site, and miR-2861 promoted osteoblast differentiation via the inhibition of HDAC5 through a primate-specific miRNA binding site. Therefore, miRNAmiR-2861 with the CRISPRa methods might be a good biomaterial for osteogenesis augmentation.

Indexed as

Cell DifferentiationHistone DeacetylasesMesenchymal Stem CellsMicroRNAsOsteogenesis3' Untranslated RegionsAnimalsBinding SitesCells, CulturedClustered Regularly Interspaced Short Palindromic RepeatsHumansOsteoblastsRepressor Proteins3' Untranslated RegionsHDAC4 protein, humanHDAC5 protein, humanHistone DeacetylasesMicroRNAsRepressor ProteinsCRISPRHistone deacetylaseMicroRNAOsteogenesis

Identifiers

PMID39506798
PMCPMC11542479

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.