Evidence map›Paper›PMID 39506095›Full record

ArticleCommunications biology2024

Infrared laser-induced gene expression in single cells characterized by quantitative imaging in Physcomitrium patens.

Takumi Tomoi, Yuka Yoshida, Suguru Ohe, Yukiko Kabeya, Mitsuyasu Hasebe, Tomohiro Morohoshi, Takashi Murata, Joe Sakamoto, Yosuke Tamada, Yasuhiro Kamei

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Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Takumi TomoiInnovation Department, Center for Innovation Support, Institute for Social Innovation and Cooperation, Utsunomiya University, Utsunomiya, Japan. t-tomoi@rs.tus.ac.jp.ORCID 0000-0002-9407-0426
Yuka YoshidaGraduate School of Regional Development and Creativity, Utsunomiya University, Utsunomiya, Japan.
Suguru OheSchool of Engineering, Utsunomiya University, Utsunomiya, Japan.
Yukiko KabeyaDivision of Evolutionary Biology, National Institute for Basic Biology, Okazaki, Japan.
Mitsuyasu HasebeDivision of Evolutionary Biology, National Institute for Basic Biology, Okazaki, Japan.ORCID 0000-0001-7425-8758
Tomohiro MorohoshiSchool of Engineering, Utsunomiya University, Utsunomiya, Japan.
Takashi MurataDivision of Evolutionary Biology, National Institute for Basic Biology, Okazaki, Japan.
Joe SakamotoLaboratory for Biothermology, National Institute for Basic Biology, Okazaki, Japan.ORCID 0000-0003-2295-0659
Yosuke TamadaSchool of Engineering, Utsunomiya University, Utsunomiya, Japan. tamada@cc.utsunomiya-u.ac.jp.
Yasuhiro KameiLaboratory for Biothermology, National Institute for Basic Biology, Okazaki, Japan. ykamei@nibb.ac.jp.ORCID 0000-0001-6382-1365

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

A spatiotemporal understanding of gene function requires the precise control of gene expression in each cell. Here, we use an infrared laser-evoked gene operator (IR-LEGO) system to induce gene expression at the single-cell level in the moss Physcomitrium patens by heating a living cell with an IR laser and thereby activating the heat shock response. We identify the laser irradiation conditions that provide higher inducibility with lower invasiveness by changing the laser power and irradiation duration. Furthermore, we quantitatively characterize the induction profile of the heat shock response using a heat-induced fluorescence reporter system after the IR laser irradiation of single cells under different conditions. Our data indicate that IR laser irradiation with long duration leads to higher inducibility according to increase in the laser power but not vice versa, and that the higher laser power even without conferring apparent damage to the cells decelerates and/or delayed gene induction. We define the temporal shift in expression as a function of onset and duration according to laser power and irradiation duration. This study contributes to the versatile application of IR-LEGO in plants and improves our understanding of heat shock-induced gene expression.

Indexed as

BryopsidaGene Expression Regulation, PlantHeat-Shock ResponseInfrared RaysLasersSingle-Cell Analysis

Identifiers

PMID39506095
PMCPMC11541703

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.