Evidence map›Paper›PMID 39504365›Full record

ArticleScience advances2024

Single-molecule profiling of per- and polyfluoroalkyl substances by cyclodextrin mediated host-guest interactions within a biological nanopore.

Xiaojun Wei, Aditya Choudhary, Leon Y Wang, Lixing Yang, Mark J Uline, Mario Tagliazucchi, Qian Wang, Dmitry Bedrov, Chang Liu

Abstract read
In one paragraph

Article in Science advances, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed.

  1. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Xiaojun WeiDepartment of Biomedical Engineering, University of South Carolina, Columbia, SC 29208, USA.ORCID 0000-0002-6229-6228
Aditya ChoudharyDepartment of Materials Science and Engineering, University of Utah, Salt Lake City, UT 84112, USA.ORCID 0000-0001-5609-3793
Leon Y WangDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA.
Lixing YangDepartment of Electrical and Electronic Engineering, The University of Melbourne, Parkville, VIC 3010, Australia.ORCID 0000-0002-1041-2733
Mark J UlineDepartment of Biomedical Engineering, University of South Carolina, Columbia, SC 29208, USA.
Mario TagliazucchiFacultad de Ciencias Exactas y Naturales, Departamento de Química Inorgánica Analítica y Química Física, Universidad de Buenos Aires, C1428 Ciudad Autónoma de Buenos Aires, Argentina.ORCID 0000-0003-4755-955X
Qian WangDepartment of Chemistry and Biochemistry, University of South Carolina, Columbia, SC 29208, USA.ORCID 0000-0002-2149-384X
Dmitry BedrovDepartment of Materials Science and Engineering, University of Utah, Salt Lake City, UT 84112, USA.
Chang LiuDepartment of Biomedical Engineering, University of South Carolina, Columbia, SC 29208, USA.ORCID 0000-0001-8097-9631

Funding

Nanopore-Based HIV Self-Test for Ultrasensitive p24 Quantification in FingerPrick BloodR61AI174295 · NIAID · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI LIU, CHANG · 2023 to 2025
$1.2M
Rapid Culture-Independent Detection of Sepsis Causing Microorganism Directly from BloodR35GM155460 · NIGMS · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI Chang Liu · 2024 to 2026
$1.2M
A Solid-State Nanopore Biosensor for Rapid Detection of Mycobacterium tuberculosis Antigens in Pediatric Blood SamplesK22AI136686 · NIAID · UNIVERSITY OF SOUTH CAROLINA AT COLUMBIA · PI LIU, CHANG · 2019 to 2020
$265k
NIAID NIH HHS K22 AI136686NIAID NIH HHS R61 AI174295NIGMS NIH HHS R35 GM155460
6 · The paper itself

Abstract

Biological nanopores are increasingly used in molecular sensing due to their single-molecule sensitivity. The detection of per- and polyfluoroalkyl substances (PFAS) like perfluorooctanoic acid and perfluorooctane sulfonic acid is critical due to their environmental prevalence and toxicity. Here, we investigate selective interactions between PFAS and four cyclodextrin (CD) variants (α-, β-, γ-, and 2-hydroxypropyl-γ-CD) within an α-hemolysin nanopore. We demonstrate that PFAS molecules can be electrochemically sensed by interacting with a γ-CD in a nanopore. Using HP-γ-CDs with increased steric resistance, we can identify homologs of the perfluoroalkyl carboxylic acid and the perfluoroalkyl sulfonic acid families and detect common PFAS in drinking water at 0.4 to 2 parts per million levels, which are further lowered to 400 parts per trillion by sample preconcentration. Molecular dynamics simulations reveal the underlying chemical mechanism of PFAS-CD interactions. These insights pave the way toward nanopore-based in situ detection with promises in environmental protection against PFAS pollution.

Indexed as

CyclodextrinsFluorocarbonsMolecular Dynamics SimulationNanoporesAlkanesulfonic AcidsCaprylatesHemolysin ProteinsSingle Molecule ImagingAlkanesulfonic AcidsCaprylatesCyclodextrinsFluorocarbonsHemolysin Proteinsperfluorooctane sulfonic acidperfluorooctanoic acid

Identifiers

PMID39504365
PMCPMC11540018

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.