Evidence map›Paper›PMID 39503492›Full record

ArticleApplied and environmental microbiology2024

Acidification-based mineral weathering mechanism involves a glucose/methanol/choline oxidoreductase in

Cintia Blanco Nouche, Laura Picard, Carine Cochet, Cedric Paris, Philippe Oger, Marie-Pierre Turpault, Stéphane Uroz

Abstract read
In one paragraph

Article in Applied and environmental microbiology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Article
  2. Article
  3. Article
  4. DecodingApplied and environmental microbiology · 2025
    Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Cintia Blanco NoucheUniversité de Lorraine, INRAE, « UMR1136 Interactions Arbres-Microorganismes », Nancy, France.
Laura PicardUniversité de Lorraine, INRAE, « UMR1136 Interactions Arbres-Microorganismes », Nancy, France.
Carine CochetINRAE, UR1138 « Biogéochimie des Ecosystèmes Forestiers », Champenoux, France.
Cedric ParisUniversité de Lorraine, EA 4367 « Laboratoire d'Ingénierie des Biomolécules », Ecole Nationale Supérieure d'Agronomie et des Industries Alimentaires (ENSAIA), Vandoeuvre-lès-Nancy, France.
Philippe OgerINSA Lyon, Université Claude Bernard Lyon 1, CNRS UMR5240, Villeurbanne, France.
Marie-Pierre TurpaultINRAE, UR1138 « Biogéochimie des Ecosystèmes Forestiers », Champenoux, France.
Stéphane UrozUniversité de Lorraine, INRAE, « UMR1136 Interactions Arbres-Microorganismes », Nancy, France.ORCID 0000-0001-9412-7210

Funding

Conseil Régional de Lorraine (Lorraine Regional Council)EC2CO programInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'Environnement (INRAE)Labex ARBRE
6 · The paper itself

Abstract

While mineral weathering (MWe) plays a key role in plant growth promotion and soil fertility, the molecular mechanisms and the genes used by bacteria to weather minerals remain poorly characterized. Acidification-based dissolution is considered the primary mechanism used by bacteria. This mechanism is historically associated with the conversion of glucose to protons and gluconic acid through the action of particular glucose dehydrogenases (GDH) dependent on the pyrroquinoline quinone (PQQ) cofactor. Recently, bacteria lacking the GDH-PQQ system have been shown to perform the same enzymatic conversion with a glucose/methanol/choline (GMC) FAD-dependent oxidoreductase. Determining whether this particular enzyme is specific or widespread is especially important in terms of ecology and evolution. Genome analysis of the effective MWe strain IMPORTANCE: This work deciphers the molecular and genetic bases used by strain PML1(12) of

Indexed as

Bacterial ProteinsGlucoseMethanolMineralsOxidoreductasesPhylogenySoil MicrobiologyBacterial ProteinsGlucoseMethanolMineralsOxidoreductasesCaballeroniaGDH-PQQ dependentgeochemistryGMC oxidoreductasemineral weathering

Identifiers

PMID39503492
PMCPMC11654791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.