Evidence map›Paper›PMID 39503046›Full record

ArticleMedical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention2023

Fully Bayesian VIB-DeepSSM.

Jadie Adams, Shireen Y Elhabian

Abstract read
In one paragraph

Article in Medical image computing and computer-assisted intervention : MICCAI ... International Conference on Medical Image Computing and Computer-Assisted Intervention, 2023. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Probabilistic 3D Correspondence Prediction from Sparse Unsegmented Images.Machine learning in medical imaging. MLMI (Workshop) · 2025
    Article
  2. Weakly Supervised Bayesian Shape Modeling from Unsegmented Medical Images.Shape in medical imaging : International Workshop, ShapeMI 2024, held in conjunction with MICCAI 2024, Marrakesh, Morocco, October 6, 2024, Proceedings. ShapeMI (Workshop) (2024 : Marrakech, Morocco) · 2025
    Article
  3. SCorP: Statistics-Informed Dense Correspondence Prediction Directly from Unsegmented Medical Images.Medical Image Understanding and Analysis. Medical Image Understanding and Analysis (Conference) · 2024
    Article
  4. OPTIMIZATION-DRIVEN STATISTICAL MODELS OF ANATOMIES USING RADIAL BASIS FUNCTION SHAPE REPRESENTATION.Proceedings. IEEE International Symposium on Biomedical Imaging · 2024
    Article
  5. Benchmarking Scalable Epistemic Uncertainty Quantification in Organ Segmentation.Uncertainty for safe utilization of machine learning in medical imaging : 5th international workshop, UNSURE 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 12, 2023, proceedings. UNSURE (Workshop) (5th : 2023... · 2023
    Article
  6. ADASSM: Adversarial Data Augmentation in Statistical Shape Models From Images.Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.) · 2023
    Article
  7. Progressive DeepSSM: Training Methodology for Image-To-Shape Deep Models.Shape in medical imaging : International Workshop, ShapeMI 2023, held in conjunction with MICCAI 2023, Vancouver, BC, Canada, October 8, 2023, Proceedings. ShapeMI (Workshop) (2023 : Vancouver, B.C.) · 2023
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Jadie AdamsScientific Computing and Imaging Institute, University of Utah, UT, USA.
Shireen Y ElhabianScientific Computing and Imaging Institute, University of Utah, UT, USA.

Funding

Population-Based Shape and Biomechanical Analysis of Hip PathoanatomyR01EB016701 · NIBIB · UNIVERSITY OF UTAH · PI ANDERSON, ANDREW EDWARD · 2013 to 2023
$3.6M
ShapeWorks in the CloudR01AR076120 · NIAMS · UNIVERSITY OF UTAH · PI ELHABIAN, SHIREEN YOUSSEF · 2019 to 2024
$2.7M
New 3D and 4D Image-Based Clinical Measures of Atrial Structural and Functional Remodeling in Atrial FibrillationR01HL135568 · NHLBI · UNIVERSITY OF UTAH · PI CATES, JOSHUA E, ELHABIAN, SHIREEN YOUSSEF · 2017 to 2020
$1.4M
ShapeWorksStudio: An Integrative, User-Friendly, and Scalable Suite for Shape Representation and AnalysisU24EB029011 · NIBIB · UNIVERSITY OF UTAH · PI ELHABIAN, SHIREEN YOUSSEF · 2019 to 2023
$1.4M
NHLBI NIH HHS R01 HL135568NIAMS NIH HHS R01 AR076120NIBIB NIH HHS R01 EB016701NIBIB NIH HHS U24 EB029011
6 · The paper itself

Abstract

Statistical shape modeling (SSM) enables population-based quantitative analysis of anatomical shapes, informing clinical diagnosis. Deep learning approaches predict correspondence-based SSM directly from unsegmented 3D images but require calibrated uncertainty quantification, motivating Bayesian formulations. Variational information bottleneck DeepSSM (VIB-DeepSSM) is an effective, principled framework for predicting probabilistic shapes of anatomy from images with aleatoric uncertainty quantification. However, VIB is only half-Bayesian and lacks epistemic uncertainty inference. We derive a fully Bayesian VIB formulation and demonstrate the efficacy of two scalable implementation approaches: concrete dropout and batch ensemble. Additionally, we introduce a novel combination of the two that further enhances uncertainty calibration via multimodal marginalization. Experiments on synthetic shapes and left atrium data demonstrate that the fully Bayesian VIB network predicts SSM from images with improved uncertainty reasoning without sacrificing accuracy.

Indexed as

Bayesian Deep LearningEpistemic Uncertainty QuantificationStatistical Shape ModelingVariational Information Bottleneck

Identifiers

PMID39503046
PMCPMC11536909

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.