Evidence map›Paper›PMID 39502914›Full record

ArticleFrontiers in plant science2024

Validation of QTLs associated with corn borer resistance and grain yield: implications in maize breeding.

Ana López-Malvar, Zoila Reséndiz-Ramirez, Ana Butrón, Jose Cruz Jiménez-Galindo, Pedro Revilla, Rosa Ana Malvar

Abstract read
In one paragraph

Article in Frontiers in plant science, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Ana López-MalvarFacultad, de Biología, Departamento de Biología Vegetal Y Ciencias del Suelo, Universidad de Vigo, Vigo, Spain.
Zoila Reséndiz-RamirezInstituto Nacional de Investigaciones Forestales, Agrícolas y Pecuarios, Río Bravo, Tamaulipas, Mexico.
Ana ButrónMisión Biológica de Galicia (CSIC), Pontevedra, Spain.
Jose Cruz Jiménez-GalindoNational Institute of Forestry Agriculture and Livestock Research (INIFAP), Cuauhtémoc, Chihuahua, Mexico.
Pedro RevillaMisión Biológica de Galicia (CSIC), Pontevedra, Spain.
Rosa Ana MalvarMisión Biológica de Galicia (CSIC), Pontevedra, Spain.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Validations of previously detected quantitative trait loci (QTLs) to assess their reliability are crucial before implementing breeding programs. The objective of this study was to determine the reliability and practical usefulness of previously reported QTLs for resistance to stem tunneling by the Mediterranean stem borer (MSB) and yield. These authors used approximately 600 recombinant inbred lines (RILs) from a multiparent advanced generation intercross (MAGIC) population to map QTL using a genome-wide association study (GWAS) approach. Methods: We identified RILs situated at the extremes of resistance and yield distributions within the whole MAGIC, and those QTLs were evaluated Results and discussion: The novel QTL validation approach was implemented using improved experimental designs that led to higher heritability estimates for both traits compared to those estimated with the whole MAGIC population. The procedure used allowed us to jointly validate several QTL and to ascertain their possible contribution to hybrid improvement. Specifically, nearly three-quarters of the QTLs for tunnel length were confirmed. Notably, QTLs located in the genomic region 6.05-6.07 were consistently validated across different sets and have been previously linked to resistance against stalk tunneling in various mapping populations. For grain yield, approximately 10 out of 16 QTLs were validated. The validation rate for yield was lower than for tunnel length, likely due to the influence of dominance and/or epistatic effects. Overall, 9 out of 21 QTLs for tunnel length and 6 out of 17 QTLs for grain yield identified in our previous research were validated across both validation sets, indicating a moderate genetic correlation between

Indexed as

grain yieldMAGIC populationmaize breedingMediterranean corn borerQTL validationrecombinant inbred lines

Identifiers

PMID39502914
PMCPMC11536317

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.