Evidence map›Paper›PMID 39502384›Full record

ArticleComputational and structural biotechnology journal2024

BioKGrapher: Initial evaluation of automated knowledge graph construction from biomedical literature.

Henning Schäfer, Ahmad Idrissi-Yaghir, Kamyar Arzideh, Hendrik Damm, Tabea M G Pakull, Cynthia S Schmidt, Mikel Bahn, Georg Lodde, Elisabeth Livingstone, Dirk Schadendorf and 3 more

Abstract read
PubMed Full text at PMC Publisher
In one paragraph

Article in Computational and structural biotechnology journal, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed.

  1. Article
  2. Article
  3. KG-DFI: A Prediction of Drug-Food Interactions Based on Knowledge Graph Embedding.Computational and structural biotechnology journal · 2026
    Article
  4. Article
  5. Article
  6. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Henning SchäferInstitute for Transfusion Medicine, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Ahmad Idrissi-YaghirDepartment of Computer Science, University of Applied Sciences and Arts Dortmund (FHDO), Emil-Figge Str. 42, Dortmund, 44227, Germany.
Kamyar ArzidehInstitute for AI in Medicine (IKIM), University Hospital Essen, Girardetstraße 2, Essen, 45131, Germany.
Hendrik DammDepartment of Computer Science, University of Applied Sciences and Arts Dortmund (FHDO), Emil-Figge Str. 42, Dortmund, 44227, Germany.
Tabea M G PakullInstitute for Transfusion Medicine, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Cynthia S SchmidtInstitute for Transfusion Medicine, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Mikel BahnInstitute for AI in Medicine (IKIM), University Hospital Essen, Girardetstraße 2, Essen, 45131, Germany.
Georg LoddeDepartment of Dermatology, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Elisabeth LivingstoneDepartment of Dermatology, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Dirk SchadendorfDepartment of Dermatology, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Felix NensaInstitute for AI in Medicine (IKIM), University Hospital Essen, Girardetstraße 2, Essen, 45131, Germany.
Peter A HornInstitute for Transfusion Medicine, University Hospital Essen, Hufelandstraße 55, Essen, 45147, Germany.
Christoph M FriedrichDepartment of Computer Science, University of Applied Sciences and Arts Dortmund (FHDO), Emil-Figge Str. 42, Dortmund, 44227, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Indexed as

Clinical guidelinesEntity linkingKnowledge graphNamed entity recognitionSoftware

Identifiers

PMID39502384
PMCPMC11536026

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.