Evidence map›Paper›PMID 39501374›Full record

ArticleParasites & vectors2024

A lightweight deep-learning model for parasite egg detection in microscopy images.

Wenbin Xu, Qiang Zhai, Jizhong Liu, Xingyu Xu, Jing Hua

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In one paragraph

Article in Parasites & vectors, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

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7citing papers in PubMed
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1 · What the graph read from it

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3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Wenbin XuNanchang Key Laboratory of Medical and Technology Research, Nanchang University, Nanchang, China.
Qiang ZhaiNanchang Key Laboratory of Medical and Technology Research, Nanchang University, Nanchang, China.
Jizhong LiuNanchang Key Laboratory of Medical and Technology Research, Nanchang University, Nanchang, China. liujizhong@ncu.edu.cn.
Xingyu XuNanchang Key Laboratory of Medical and Technology Research, Nanchang University, Nanchang, China.
Jing HuaSchool of Software, Jiangxi Agricultural University, Nanchang, China. 2790028588@qq.com.

Funding

Jiangxi Natural Science Foundation 20224BAB202038Jiangxi Province "Double Thousand Plan" Project JXSQ2023201073
6 · The paper itself

Abstract

backgroundIntestinal parasitic infections are still a serious public health problem in developing countries, and the diagnosis of parasitic infections requires the first step of parasite/egg detection of samples. Automated detection can eliminate the dependence on professionals, but the current detection algorithms require large computational resources, which increases the lower limit of automated detection. Therefore, we have designed a lightweight deep-learning model, YAC-Net, to achieve rapid and accurate detection of parasitic eggs and reduce the cost of automation.

methodsThis paper uses the ICIP 2022 Challenge dataset for experiments, and the experiments are conducted using fivefold cross-validation. The YOLOv5n model is used as the baseline model, and then two improvements are made to the baseline model based on the specificity of the egg data. First, the neck of the YOLOv5n is modified to from a feature pyramid network (FPN) to an asymptotic feature pyramid network (AFPN) structure. Different from the FPN structure, which mainly integrates semantic feature information at adjacent levels, the hierarchical and asymptotic aggregation structure of AFPN can fully fuse the spatial contextual information of egg images, and its adaptive spatial feature fusion mode can help the model select beneficial feature and ignore redundant information, thereby reducing computational complexity and improving detection performance. Second, the C3 module of the backbone of the YOLOv5n is modified to a C2f module, which can enrich gradient information, improving the feature extraction capability of the backbone. Moreover, ablation studies are designed by us to verify the effectiveness of the AFPN and C2f modules in the process of model lightweighting.

resultsThe experimental results show that compared with YOLOv5n, YAC-Net improves precision by 1.1%, recall by 2.8%, the F1 score by 0.0195, and mAP_0.5 by 0.0271 and reduces the parameters by one-fifth. Compared with some state-of-the-art detection methods, YAC-Net achieves the best performance in precision, F1 score, mAP_0.5, and parameters. The precision, recall, F1 score, mAP_0.5, and parameters of our method on the test set are 97.8%, 97.7%, 0.9773, 0.9913, and 1,924,302, respectively.

conclusionsCompared with the baseline model, YAC-Net optimizes the model structure and simplifies the parameters while ensuring the detection performance. It helps to reduce the equipment requirements for performing automated detection and can be used to realize the automatic detection of parasite eggs under microscope images.

Indexed as

Deep LearningDiagnosis, Computer-AssistedImage Processing, Computer-AssistedIntestinal Diseases, ParasiticParasite Egg CountAnimalsConvolutional Neural NetworksFecesHumansMicroscopyAFPNDeep learningLightweight designObject detectionParasite eggs

Identifiers

PMID39501374
PMCPMC11539555

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.