Evidence map›Paper›PMID 39500991›Full record

ArticleCommunications biology2024

The impact of data resolution on dynamic causal inference in multiscale ecological networks.

Erik Saberski, Tom Lorimer, Delia Carpenter, Ethan Deyle, Ewa Merz, Joseph Park, Gerald M Pao, George Sugihara

Abstract read
In one paragraph

Article in Communications biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

3 citing papers in PubMed.

  1. Marine ecosystems in peril: Time to prepare for super El Niño.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  2. Article
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Erik SaberskiScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA. eriksaberski@gmail.com.ORCID 0000-0002-6475-6187
Tom LorimerScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA.
Delia CarpenterScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA.
Ethan DeyleDepartment of Biology, Boston University, Boston, MA, 02215, USA.ORCID 0000-0001-8704-8434
Ewa MerzScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA.ORCID 0000-0001-8699-9414
Joseph ParkScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA.ORCID 0000-0001-5411-1409
Gerald M PaoOkinawa Institute of Science and Technology Graduate University, Biological Nonlinear Dynamics Data Science Unit, 1919-1 Tancha, Onna-son, Okinawa, 904-0495, Japan.
George SugiharaScripps Institution of Oceanography, 9500 Gilman Drive, La Jolla, CA, 92093-0206, USA. gsugihara@gmail.com.

Funding

Department of the Interior | National Park Service (NPS) DOI-NPS-P20AC00527National Science Foundation (NSF) NSF ABI-1667584
6 · The paper itself

Abstract

While it is commonly accepted that ecosystem dynamics are nonlinear, what is often not acknowledged is that nonlinearity implies scale-dependence. With the increasing availability of high-resolution ecological time series, there is a growing need to understand how scale and resolution in the data affect the construction and interpretation of causal networks-specifically, networks mapping how changes in one variable drive changes in others as part of a shared dynamic system ("dynamic causation"). We use Convergent Cross Mapping (CCM), a method specifically designed to measure dynamic causation, to study the effects of varying temporal and taxonomic/functional resolution in data when constructing ecological causal networks. As the system is viewed at different scales relationships will appear and disappear. The relationship between data resolution and interaction presence is not random: the temporal scale at which a relationship is uncovered identifies a biologically relevant scale that drives changes in population abundance. Further, causal relationships between taxonomic aggregates (low-resolution) are shown to be influenced by the number of interactions between their component species (high-resolution). Because no single level of resolution captures all the causal links in a system, a more complete understanding requires multiple levels when constructing causal networks.

Indexed as

EcosystemAnimalsEcologyModels, BiologicalPopulation Dynamics

Identifiers

PMID39500991
PMCPMC11538442

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.