Evidence map›Paper›PMID 39500898›Full record

ArticleNature communications2024

Plasmid-encoded phosphatase RapP enhances cell growth in non-domesticated Bacillus subtilis strains.

Manlu Zhu, Yiheng Wang, Haoyan Mu, Fei Han, Qian Wang, Yongfu Pei, Xin Wang, Xiongfeng Dai

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Screening and characterization ofMicrobiology spectrum · 2026
    Article
  2. Heterologous expression ofEngineering microbiology · 2026
    Article
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Manlu ZhuState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.ORCID 0000-0003-0225-5704
Yiheng WangState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.ORCID 0000-0002-9726-7005
Haoyan MuState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.
Fei HanState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.
Qian WangState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.
Yongfu PeiState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.
Xin WangState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China.
Xiongfeng DaiState Key Laboratory of Green Pesticide; Hubei Key Laboratory of Genetic Regulation and Integrative Biology, School of Life Sciences, Central China Normal University, Wuhan, PR China. daixiongfeng@ccnu.edu.cn.ORCID 0000-0002-8225-1799

Funding

National Natural Science Foundation of China (National Science Foundation of China) 32370044National Natural Science Foundation of China (National Science Foundation of China) 32470038
6 · The paper itself

Abstract

The trade-off between rapid growth and other important physiological traits (e.g., survival and adaptability) poses a fundamental challenge for microbes to achieve fitness maximization. Studies on Bacillus subtilis biology often use strains derived after a process of lab 'domestication' from an ancestral strain known as Marburg strain. The domestication process led to loss of a large plasmid (pBS32) encoding a phosphatase (RapP) that dephosphorylates the Spo0F protein and thus regulates biofilm formation and sporulation. Here, we show that plasmid pBS32, and more specifically rapP, enhance growth rates by preventing premature expression of the Spo0F-Spo0A-mediated adaptive response during exponential phase. This results in reallocation of proteome resources towards biosynthetic, growth-promoting pathways without compromising long-term fitness during stationary phase. Thus, RapP helps B. subtilis to constrain physiological trade-offs and economize cellular resources for fitness improvement.

Indexed as

Bacillus subtilisBacterial ProteinsPlasmidsBiofilmsGene Expression Regulation, BacterialPhosphoric Monoester HydrolasesPhosphorylationSpores, BacterialTranscription FactorsBacterial ProteinsPhosphoric Monoester HydrolasesSpo0A protein, Bacillus subtilisTranscription Factors

Identifiers

PMID39500898
PMCPMC11538241

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.