Evidence map›Paper›PMID 39499382›Full record

ArticleArchives of virology2024

Molecular epidemiology and genetic characterization of hepatitis B virus in two major provinces of Pakistan.

Iqra Almas, Saeeda Tariq, Iram Amin, Muhammad Shahid, Muhammad Idrees, Samia Afzal

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Article in Archives of virology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Iqra AlmasDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan.
Saeeda TariqDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan.
Iram AminDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan.
Muhammad ShahidDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan.
Muhammad IdreesDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan.
Samia AfzalDivision of Molecular Centre of Excellence in Molecular Biology (CEMB), University of the Punjab, 87 West Canal Bank Road, Thokar Niaz baig, ، Quaid-i-Azam Campus, Lahore, 53700, Punjab, Pakistan. samiaraza@live.com.ORCID http://orcid.org/0000-0002-3298-5735

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Hepatitis B virus (HBV) infection is a major public health issue and is responsible for considerable morbidity and mortality globally. In Pakistan, the prevalence of chronic HBV infection varies from 2% to 4%, with an estimated exposure rate of approximately 34%. The major objective of this study was to determine the prevalence of HBV genotypes and the pattern of escape mutations in the HBV S gene in two major provinces of Pakistan: Punjab and Khyber Pakhtunkhwa. A total of 146 serum/plasma samples collected from hepatitis B patients were sequenced by the Sanger method. Phylogenetic analysis indicated the intermixed circulation of closely related strains of HBV genotype D and subgenotypes HBV/D1, HBV/D2, and HBV/A2 in both provinces, and various escape mutations (Y100C, P120S/T, G119R, C121S/Y, R122K, T126I, A128V, Q129H/R, G130R, T131N/I, M133T/I, Y134N, C137W, S143L, and D144E) were identified. These findings provide important insights into the current prevalence of HBV genotypes in Pakistan and will help in the establishment of more-efficient disease interventions and patient management strategies.

Indexed as

GenotypeHepatitis B virusMolecular EpidemiologyPhylogenyAdolescentAdultDNA, ViralFemaleHepatitis BHepatitis B, ChronicHepatitis B Surface AntigensHumansMaleMiddle AgedMutationPakistanDNA, ViralHepatitis B Surface Antigens

Identifiers

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.