Evidence map›Paper›PMID 39498230›Full record

ArticleThe Japanese dental science review2024

Optimal storage time and temperature of human oral samples to minimize microbiome changes: A scoping review.

Hyun Ju Kim, Dong Hyun Park, Seung Hyun Han, Sun-Young Kim

Abstract readScoping Review
In one paragraph

Article in The Japanese dental science review, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Journal of conservative dentistry and endodontics · 2026
    Article
  4. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hyun Ju KimDepartment of Periodontics, Seoul National University Dental Hospital, 101 Daehakro, Jongno-gu, Seoul 03080, Republic of Korea.
Dong Hyun ParkDepartment of Oral Microbiology and Immunology, and Dental Research Institute, School of Dentistry, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Republic of Korea.
Seung Hyun HanDepartment of Oral Microbiology and Immunology, and Dental Research Institute, School of Dentistry, Seoul National University, 1 Gwanak-ro, Gwanak-gu, Seoul 08826, Republic of Korea.
Sun-Young KimDepartment of Conservative Dentistry and Dental Research Institute, School of Dentistry, Seoul National University, 101 Daehakro, Jongno-gu, Seoul 03080, Republic of Korea.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Improper storage times and temperatures negatively impact the quality of biospecimens with oral microbiomes. This study aimed to determine the optimal storage time and temperature for maintaining the integrity of human dental plaque and saliva samples' microbial profiles. A comprehensive search yielded 5433 studies, with 12 meeting inclusion criteria. The number of studies on the storage time and temperature for plaque or saliva samples was extremely limited, with large variability in study designs and analytical tools. The best approach for dental plaque and saliva samples was to immediately freeze fresh specimens at - 80 °C or lower until DNA extraction, with a recommended storage time not exceeding 1-2 years, regardless of temperature. Checkerboard DNA-DNA hybridization-based studies suggested dental plaque storage at - 20 °C for 6 months, but a shorter duration was advised. Based on 16 S rRNA gene sequencing studies, dental plaque samples could be stored at - 80 °C for 6 months in 75 % ethanol or Bead Solution. Dental plaque and saliva samples could be stored at room temperature for 1-2 weeks without significant microbiome changes if stored in appropriate media. Further well-designed randomized controlled studies with longer-storage duration are necessary to establish more definitive guidelines.

Indexed as

Dental plaqueMicrobiomeSalivaStorage temperatureStorage time

Identifiers

PMID39498230
PMCPMC11533461

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.