Evidence map›Paper›PMID 39497114›Full record

ArticleMicrobial cell factories2024

Improvement of succinate production from methane by combining rational engineering and laboratory evolution in Methylomonas sp. DH-1.

Jae-Hwan Jo, Jeong-Ho Park, Byung Kwon Kim, Seon Jeong Kim, Chan Mi Park, Chang Keun Kang, Yong Jun Choi, Hyejin Kim, Eun Yeol Lee, Myounghoon Moon and 7 more

Abstract read
In one paragraph

Article in Microbial cell factories, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Review
  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

17 authors.

Jae-Hwan Jo *Bioenergy and Resources Upcycling Research Laboratory, Korea Institute of Energy Research, Daejeon, 34129, Republic of Korea.
Jeong-Ho Park *Institute of Biotechnology, CJ CheilJedang Co, Gyeonggi-Do, Suwon-Si, 16495, Republic of Korea.
Byung Kwon KimResearch Institute, GI Biome Inc., Seongnam, Gyeonggi-Do, 13201, Republic of Korea.
Seon Jeong KimGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Chan Mi ParkGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Chang Keun KangSchool of Environmental Engineering, University of Seoul, Seoul, 02504, Republic of Korea.
Yong Jun ChoiSchool of Environmental Engineering, University of Seoul, Seoul, 02504, Republic of Korea.
Hyejin KimDepartment of Chemical Engineering, Kyung Hee University, Gyeonggi-do, 17104, Republic of Korea.
Eun Yeol LeeDepartment of Chemical Engineering, Kyung Hee University, Gyeonggi-do, 17104, Republic of Korea.
Myounghoon MoonGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Gwon Woo ParkGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Sangmin LeeDepartment of Bio-Environmental Chemistry, College of Agriculture and Life Sciences, Chungnam National University, Daejeon, 34134, Republic of Korea.
Soo Youn LeeGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Jin-Suk LeeGwangju Clean Energy Research Center, Korea Institute of Energy Research, Gwangju, 61003, Republic of Korea.
Won-Heong LeeDepartment of Integrative Food, Bioscience and Biotechnology (BK21 FOUR), Chonnam National University, Gwangju, 61186, Republic of Korea.
Jeong-Il KimInterdisciplinary Program for Agriculture and Life Sciences, Chonnam National University, Gwangju, 61186, Republic of Korea. kimji@chonnam.ac.kr.
Min-Sik KimBioenergy and Resources Upcycling Research Laboratory, Korea Institute of Energy Research, Daejeon, 34129, Republic of Korea. kms0540@kier.re.kr.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recently, methane has been considered a next-generation carbon feedstock due to its abundance and it is main component of shale gas and biogas. Methylomonas sp. DH-1 has been evaluated as a promising industrial bio-catalyst candidate. Succinate is considered one of the top building block chemicals in the agricultural, food, and pharmaceutical industries. In this study, succinate production by Methylomonas sp. DH-1 was improved by combining adaptive laboratory evolution (ALE) technology with genetic engineering in the chromosome of Methylomonas sp. DH-1, such as deletion of bypass pathway genes (succinate dehydrogenase and succinate semialdehyde dehydrogenase) or overexpression of genes related with succinate production (citrate synthase, pyruvate carboxylase and phosphoenolpyruvate carboxylase). Through ALE, the maximum consumption rate of substrate gases (methane and oxygen) and the duration maintaining high substrate gas consumption rates was enhanced compared to those of the parental strain. Based on the improved methane consumption, cell growth (OD

Indexed as

Metabolic EngineeringMethaneMethylomonasSuccinic AcidDirected Molecular EvolutionMethaneSuccinic AcidGas fermentationMethaneMethanotrophSuccinate

Identifiers

PMID39497114
PMCPMC11533326

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.