Evidence map›Paper›PMID 39495821›Full record

ArticleeLife2024

Cryo-electron tomographic investigation of native hippocampal glutamatergic synapses.

Aya Matsui, Cathy Spangler, Johannes Elferich, Momoko Shiozaki, Nikki Jean, Xiaowei Zhao, Maozhen Qin, Haining Zhong, Zhiheng Yu, Eric Gouaux

Abstract read
In one paragraph

Article in eLife, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed.

  1. Article
  2. Review
  3. Cryogenic electron tomography by the numbers: Charting underexplored lineages in structural cell biology.Proceedings of the National Academy of Sciences of the United States of America · 2026
    Article
  4. Article
  5. Article
  6. Dimeric gold nanoparticles enable multiplexed labeling in cryoelectron tomography.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  7. Dynamic extracellular interactions with AMPA receptors.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  8. Cryo-EM single-particle analysis expanding towards increasingly native samples.Acta crystallographica. Section D, Structural biology · 2025
    Review
  9. Article
  10. Article
  11. Review
  12. Article
  13. Article
  14. Article
  15. Review
  16. Article
  17. Article
  18. Article
  19. bioRxiv : the preprint server for biology · 2024
    Article
  20. Activity-dependent diffusion trapping of AMPA receptors as a key step for expression of early LTP.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2024
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Aya Matsui *Howard Hughes Medical Institute, Oregon Health and Science University, Portland, United States.ORCID https://orcid.org/0000-0003-4437-8278
Cathy Spangler *Vollum Institute, Oregon Health and Science University, Portland, United States.ORCID https://orcid.org/0000-0003-2334-3957
Johannes ElferichRNA Therapeutics Institute, University of Massachusetts Chan Medical School, Howard Hughes Medical Institute, Worcester, United States.ORCID https://orcid.org/0000-0002-9911-706X
Momoko ShiozakiHoward Hughes Medical Institute, Janelia Research Institute, Ashburn, United States.
Nikki JeanHoward Hughes Medical Institute, Janelia Research Institute, Ashburn, United States.
Xiaowei ZhaoHoward Hughes Medical Institute, Janelia Research Institute, Ashburn, United States.
Maozhen QinVollum Institute, Oregon Health and Science University, Portland, United States.
Haining ZhongVollum Institute, Oregon Health and Science University, Portland, United States.ORCID https://orcid.org/0000-0002-7109-4724
Zhiheng YuHoward Hughes Medical Institute, Janelia Research Institute, Ashburn, United States.
Eric GouauxHoward Hughes Medical Institute, Oregon Health and Science University, Portland, United States.ORCID https://orcid.org/0000-0002-8549-2360

Funding

3D STRUCTURE/FUNCTION OF LIGAND GATED ION CHANNELSR01NS038631 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI GOUAUX, JAMES E · 1999 to 2024
$6.7M
3D Structure and Function of Ligand-Gated Ion ChannelsR37NS038631 · NINDS · OREGON HEALTH & SCIENCE UNIVERSITY · PI James E Gouaux · 2009 to 2026
$4.1M
Characterization of native AMPA receptor structure and function in glioblastomaK00CA253730 · NCI · OREGON HEALTH & SCIENCE UNIVERSITY · PI SPANGLER, CATHERINE JEANETTE · 2022 to 2025
$409k
Structure-Guided Mechanistic Studies of Dot1L in Mixed Lineage LeukemiaF99CA253730 · NCI · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SPANGLER, CATHERINE JEANETTE · 2020 to 2021
$76k
National Institute of Neurological Disorders & Stroke NS038631NCI NIH HHS CA253730NCI NIH HHS F99 CA253730NCI NIH HHS K00 CA253730NINDS NIH HHS R01 NS038631NINDS NIH HHS R37 NS038631
6 · The paper itself

Abstract

Chemical synapses are the major sites of communication between neurons in the nervous system and mediate either excitatory or inhibitory signaling. At excitatory synapses, glutamate is the primary neurotransmitter and upon release from presynaptic vesicles, is detected by postsynaptic glutamate receptors, which include ionotropic AMPA and NMDA receptors. Here, we have developed methods to identify glutamatergic synapses in brain tissue slices, label AMPA receptors with small gold nanoparticles (AuNPs), and prepare lamella for cryo-electron tomography studies. The targeted imaging of glutamatergic synapses in the lamella is facilitated by fluorescent pre- and postsynaptic signatures, and the subsequent tomograms allow for the identification of key features of chemical synapses, including synaptic vesicles, the synaptic cleft, and AuNP-labeled AMPA receptors. These methods pave the way for imaging brain regions at high resolution, using unstained, unfixed samples preserved under near-native conditions.

Indexed as

Electron Microscope TomographyGlutamic AcidHippocampusSynapsesAnimalsCryoelectron MicroscopyGoldMetal NanoparticlesMiceReceptors, AMPAGlutamic AcidGoldReceptors, AMPAAMPA receptorscryo-EThippocampus synapsemolecular biophysicsmousestructural biology

Identifiers

PMID39495821
PMCPMC11534335

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.