Evidence map›Paper›PMID 39494616›Full record

ArticleDevelopment (Cambridge, England)2024

A genome-engineered tool set for Drosophila TGF-β/BMP signaling studies.

Clara-Maria Ell, Abu Safyan, Mrinal Chayengia, Manuela M M Kustermann, Jennifer Lorenz, Melanie Schächtle, George Pyrowolakis

Abstract read
In one paragraph

Article in Development (Cambridge, England), 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
  2. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Clara-Maria EllSpemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0002-8070-3149
Abu SafyanCIBSS - Centre for Integrative Biological Signalling Studies, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0002-2229-1764
Mrinal ChayengiaInstitute for Biology I, Faculty of Biology, HMH, Habsburgerstr. 49, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0003-2626-3637
Manuela M M KustermannInstitute for Biology I, Faculty of Biology, HMH, Habsburgerstr. 49, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0002-0775-1814
Jennifer LorenzSpemann Graduate School of Biology and Medicine (SGBM), University of Freiburg, 79104 Freiburg, Germany.ORCID 0009-0008-7494-0034
Melanie SchächtleInstitute for Biology I, Faculty of Biology, HMH, Habsburgerstr. 49, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0001-8261-779X
George PyrowolakisCIBSS - Centre for Integrative Biological Signalling Studies, University of Freiburg, 79104 Freiburg, Germany.ORCID 0000-0002-2142-5943

Funding

Resource Component: Acquisition, maintenance and distribution of Drosophila stocksP40OD018537 · OD · TRUSTEES OF INDIANA UNIVERSITY · PI Annette L. Parks · 2014 to 2026
$13.5M
Albert-Ludwigs-Universität FreiburgDeutsche Forschungsgemeinschaft EXC-2189-Project ID 390939984NIH HHS P40 OD018537
6 · The paper itself

Abstract

Ligands of the TGF-β/BMP superfamily are crucially involved in the regulation of growth, patterning and organogenesis and can act as long-range morphogens. Essential for understanding TGF-β/BMP signaling dynamics and regulation are tools that allow monitoring and manipulating pathway components at physiological expression levels and endogenous spatiotemporal patterns. We used genome engineering to generate a comprehensive library of endogenously epitope- or fluorescent-tagged versions of receptors, co-receptors, transcription factors and key feedback regulators of the Drosophila BMP and Activin signaling pathways. We demonstrate that the generated alleles are biologically active and can be used for assessing tissue and subcellular distribution of the corresponding proteins. Furthermore, we show that the genomic platforms can be used for in locus structure-function and cis-regulatory analyses. Finally, we present a complementary set of protein binder-based tools, which allow visualization as well as manipulation of the stability and subcellular localization of epitope-tagged proteins, providing new tools for the analysis of BMP signaling and beyond.

Indexed as

Bone Morphogenetic ProteinsDrosophila ProteinsSignal TransductionTransforming Growth Factor betaAnimalsDrosophilaDrosophila melanogasterGenetic EngineeringGenome, InsectBone Morphogenetic ProteinsDrosophila ProteinsTransforming Growth Factor betaDrosophila developmentEndogenous protein taggingFunctionalized protein binder toolsOogenesisTGF-β/BMP signalingWing imaginal disc

Identifiers

PMID39494616
PMCPMC11607693

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.