Evidence map›Paper›PMID 39493766›Full record

ArticleFrontiers in immunology2024

Age-specific changes in the serum proteome of female anadromous, hilsa

Hena Chakraborty, Hirak Jyoti Chakraborty, Basanta Kumar Das, Joydev Maity

Abstract readComparative Study
In one paragraph

Article in Frontiers in immunology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 2 papers.

0numbers the graph read from it
0cells of the map it votes in
2citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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3 · Its place in the literature

Who cites it

2 citing papers in PubMed.

  1. Article
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4 · The record

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PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Hena ChakrabortyCenter for NMCG (National Mission for Clean Ganga), Indian Council of Agricultural Research (ICAR)-Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India.
Hirak Jyoti ChakrabortyCenter for NMCG (National Mission for Clean Ganga), Indian Council of Agricultural Research (ICAR)-Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India.
Basanta Kumar DasCenter for NMCG (National Mission for Clean Ganga), Indian Council of Agricultural Research (ICAR)-Central Inland Fisheries Research Institute, Barrackpore, West Bengal, India.
Joydev MaityDepartment of Fisheries Science, Vidyasagar University, Midnapore, West Bengal, India.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: The proteome profile of the female Methods: Advanced liquid chromatography-tandem mass spectrometry LC-MS/MS-based proteomic data were analysed and submitted to the ProteomeXchange Consortium via PRIDE (PRoteomics IDEntifications database). Bioinformatics analysis of serum proteome have been done and it showed different proteins associated with GO Gene Ontology () terms, and the genes associated with enriched KEGG (Kyoto Encyclopedia of Genes and Genomes) pathways (such as phagosome, mTOR, Apelin signalling pathways, herpes simplex virus) implicated in immune responses. Results: The expression levels of important immunological proteins, such as those involved in cellular defence and inflammatory responses, were significantly different age-dependently. In this study, we annotated 952, 494, 415, and 282 proteins in year classes IV, III, II, and I Hilsa, respectively, and analysed their Protein-Protein Interaction (PPI) networks based on their functional characteristics. From year classes I to IV, new proteins appeared and were more than three-fold. Notably, class I hilsa displayed a lower abundance of proteins than class IV hilsa. Discussion: This is the first study, to the best of our knowledge, to report the analysis of the serum proteome of hilsa at different developmental stages, and the results can help improve the understanding of the mechanisms underlying the different changes in protein enrichment during migration in hilsa. This analysis also offers crucial insights into the immune system for hilsa conservation and management.

Indexed as

ProteomeAge FactorsAgingAnimalsBlood ProteinsChromatography, LiquidComputational BiologyFemaleFishesProtein Interaction MapsProteomicsTandem Mass SpectrometryBlood ProteinsProteomehilsaKyoto Encyclopedia of Genes and GenomesLiquid Chromatography-tandem Mass Spectrometrynetwork analysisproteinproteomicsSTRING

Identifiers

PMID39493766
PMCPMC11527666

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