Evidence map›Paper›PMID 39488533›Full record

ArticleNature communications2024

Single-molecule imaging and molecular dynamics simulations reveal early activation of the MET receptor in cells.

Yunqing Li, Serena M Arghittu, Marina S Dietz, Gabriel J Hella, Daniel Haße, Davide M Ferraris, Petra Freund, Hans-Dieter Barth, Luisa Iamele, Hugo de Jonge and 3 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Quantitative Mapping of Nanoscale EGFR-Grb2 Assemblies by DNA-PAINT.Chemphyschem : a European journal of chemical physics and physical chemistry · 2026
    Article
  2. Article
  3. Review
  4. Single-Molecule FRET-Tracking of InlB-Activated MET Receptors in Living Cells.Small (Weinheim an der Bergstrasse, Germany) · 2026
    Article
  5. Article
  6. Article
  7. Article
  8. Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Yunqing Li *Institute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Max-von-Laue-Str. 7, Frankfurt am Main, Germany.
Serena M Arghittu *Frankfurt Institute for Advanced Studies, Ruth-Moufang-Str. 1, Frankfurt am Main, Germany.ORCID 0009-0001-6004-4473
Marina S DietzInstitute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Max-von-Laue-Str. 7, Frankfurt am Main, Germany.ORCID 0000-0003-0504-1824
Gabriel J HellaFrankfurt Institute for Advanced Studies, Ruth-Moufang-Str. 1, Frankfurt am Main, Germany.ORCID 0009-0003-1905-6725
Daniel HaßeDepartment of Chemistry, Bielefeld University, Universitaetsstr. 25, Bielefeld, Germany.
Davide M FerrarisDepartment of Pharmaceutical Sciences, University of Piemonte Orientale, Largo Donegani 2, Novara, Italy.ORCID 0000-0001-5112-9910
Petra FreundInstitute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Max-von-Laue-Str. 7, Frankfurt am Main, Germany.
Hans-Dieter BarthInstitute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Max-von-Laue-Str. 7, Frankfurt am Main, Germany.
Luisa IameleDepartment of Molecular Medicine, University of Pavia, Immunology and General Pathology Section, Via Ferrata 9, Pavia, Italy.
Hugo de JongeDepartment of Molecular Medicine, University of Pavia, Immunology and General Pathology Section, Via Ferrata 9, Pavia, Italy.
Hartmut H NiemannDepartment of Chemistry, Bielefeld University, Universitaetsstr. 25, Bielefeld, Germany.ORCID 0000-0002-8582-0360
Roberto CovinoFrankfurt Institute for Advanced Studies, Ruth-Moufang-Str. 1, Frankfurt am Main, Germany. covino@fias.uni-frankfurt.de.
Mike HeilemannInstitute of Physical and Theoretical Chemistry, Goethe-University Frankfurt, Max-von-Laue-Str. 7, Frankfurt am Main, Germany. heilemann@chemie.uni-frankfurt.de.ORCID 0000-0002-9821-3578

Funding

Deutsche Forschungsgemeinschaft (German Research Foundation) CRC 1507Deutsche Forschungsgemeinschaft (German Research Foundation) INST 161/778-1 FUGGDeutsche Forschungsgemeinschaft (German Research Foundation) NI 694/3-1
6 · The paper itself

Abstract

Embedding of cell-surface receptors into a membrane defines their dynamics but also complicates experimental characterization of their signaling complexes. The hepatocyte growth factor receptor MET is a receptor tyrosine kinase involved in cellular processes such as proliferation, migration, and survival. It is also targeted by the pathogen Listeria monocytogenes, whose invasion protein, internalin B (InlB), binds to MET, forming a signaling dimer that triggers pathogen internalization. Here we use an integrative structural biology approach, combining molecular dynamics simulations and single-molecule Förster resonance energy transfer (smFRET) in cells, to investigate the early stages of MET activation. Our simulations show that InlB binding stabilizes MET in a conformation that promotes dimer formation. smFRET reveals that the in situ dimer structure closely resembles one of two previously published crystal structures, though with key differences. This study refines our understanding of MET activation and provides a methodological framework for studying other plasma membrane receptors.

Indexed as

Bacterial ProteinsFluorescence Resonance Energy TransferListeria monocytogenesMembrane ProteinsMolecular Dynamics SimulationProto-Oncogene Proteins c-metSingle Molecule ImagingHumansProtein BindingProtein MultimerizationSignal TransductionBacterial ProteinsinlB protein, Listeria monocytogenesMembrane ProteinsMET protein, humanProto-Oncogene Proteins c-met

Identifiers

PMID39488533
PMCPMC11531568

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.