Evidence map›Paper›PMID 39488530›Full record

ArticleNature communications2024

Oncogenic EML4-ALK assemblies suppress growth factor perception and modulate drug tolerance.

David Gonzalez-Martinez, Lee Roth, Thomas R Mumford, Juan Guan, Anh Le, Robert C Doebele, Bo Huang, Asmin Tulpule, Magdalena Niewiadomska-Bugaj, Trever G Bivona and 1 more

Abstract read
In one paragraph

Article in Nature communications, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 14 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
14citing papers in PubMed, 1 pooled it
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

14 citing papers in PubMed, 1 synthesis or guideline pooled it.

  1. Pooled it
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  14. Principles and functions of condensate modifying drugs.Frontiers in molecular biosciences · 2022
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

David Gonzalez-Martinez *Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID 0000-0003-1782-9133
Lee Roth *Department of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.ORCID 0000-0001-9290-2463
Thomas R MumfordDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA.
Juan GuanDepartment of Physics, Department of Anatomy and Cell Biology, University of Florida, Gainesville, FL, 32611, USA.
Anh LeDivision of Medical Oncology, University of Colorado School of Medicine, Aurora, CO, 80045, USA.
Robert C DoebeleDivision of Medical Oncology, University of Colorado School of Medicine, Aurora, CO, 80045, USA.ORCID 0000-0001-6728-6857
Bo HuangDepartment of Pharmaceutical Chemistry, UCSF, San Francisco, 94143, USA.ORCID 0000-0003-1704-4141
Asmin TulpuleDepartment of Pediatrics, Memorial Sloan Kettering Cancer Center, New York, NY, 10065, USA.
Magdalena Niewiadomska-BugajDepartment of Statistics, Western Michigan University, Kalamazoo, MI, 49008, USA.
Trever G BivonaDepartment of Medicine, Division of Hematology and Oncology, UCSF, San Francisco, CA, 94143, USA.ORCID 0000-0001-5734-4128
Lukasz J BugajDepartment of Bioengineering, University of Pennsylvania, Philadelphia, PA, 19104, USA. bugaj@seas.upenn.edu.ORCID 0000-0002-0749-2912

Funding

X-RAY CRYSTALLOGRAPHYP30CA008748 · NCI · SLOAN-KETTERING INSTITUTE FOR CANCER RES · PI SELWYN M VICKERS · 1985 to 2026
$347.4M
UCSF Project 1U54CA224081 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI CALVIN J KUO · 2017 to 2026
$12.9M
Characterization of YAP as a rational companion target in lung cancerR01CA204302 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Trever G Bivona · 2017 to 2026
$3.7M
Rational Combined Inhibition of NF-kB and EGFR to Optimize Lung Cancer TreatmentR01CA169338 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G · 2013 to 2023
$3.4M
Harnessing protein clustering to understand, identify, and manipulate cellular systemsR35GM138211 · NIGMS · UNIVERSITY OF PENNSYLVANIA · PI Lukasz Bugaj · 2020 to 2026
$3.3M
Dissecting the role and mechanism of EML4-ALK condensates in oncogenic signaling and tumor growthR01CA279180 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI Trever G Bivona, Bo Huang · 2023 to 2026
$2.6M
(PQ7) Defining a new mode of RAS signaling in cancer from cytoplasmic protein granulesR01CA231300 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G, HUANG, BO · 2019 to 2023
$2.3M
Mechanisms of Assembly and Functional Regulation in Non-canonical Biomolecular CondensatesR35GM146877 · NIGMS · UNIVERSITY OF TEXAS AT AUSTIN · PI Juan Guan · 2022 to 2026
$2.0M
Optimizing biologically-based rational polytherapy in ALK+ lung cancerR01CA211052 · NCI · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BIVONA, TREVER G · 2017 to 2021
$1.8M
Acquisition of a Cell Sorter for Systems Biology and Cellular EngineeringS10OD026986 · OD · UNIVERSITY OF PENNSYLVANIA · PI BUGAJ, LUKASZ · 2020 to 2020
$439k
American Cancer Society (American Cancer Society, Inc.) RSG-22-176-01-TBENCI NIH HHS P30 CA008748NCI NIH HHS R01 CA169338NCI NIH HHS R01 CA204302NCI NIH HHS R01 CA211052NCI NIH HHS R01 CA231300NCI NIH HHS R01 CA279180NCI NIH HHS U54 CA224081NIGMS NIH HHS R35 GM138211NIGMS NIH HHS R35 GM146877NIH HHS S10 OD026986
6 · The paper itself

Abstract

Drug resistance remains a challenge for targeted therapy of cancers driven by EML4-ALK and related fusion oncogenes. EML4-ALK forms cytoplasmic protein condensates, which result from networks of interactions between oncogene and adapter protein multimers. While these assemblies are associated with oncogenic signaling, their role in drug response is unclear. Here, we use optogenetics and live-cell imaging to find that EML4-ALK assemblies suppress transmembrane receptor tyrosine kinase (RTK) signaling by sequestering RTK adapter proteins including GRB2 and SOS1. Furthermore, ALK inhibition, while suppressing oncogenic signaling, simultaneously releases the sequestered adapters and thereby resensitizes RTK signaling. Resensitized RTKs promote rapid and pulsatile ERK reactivation that originates from paracrine ligands shed by dying cells. Reactivated ERK signaling promotes cell survival, which can be counteracted by combination therapies that block paracrine signaling. Our results identify a regulatory role for RTK fusion assemblies and uncover a mechanism of tolerance to targeted therapies.

Indexed as

Drug Resistance, NeoplasmOncogene Proteins, FusionAnimalsCell Line, TumorGRB2 Adaptor ProteinHumansIntercellular Signaling Peptides and ProteinsMiceOptogeneticsReceptor Protein-Tyrosine KinasesSignal TransductionEML4-ALK fusion protein, humanGRB2 Adaptor ProteinIntercellular Signaling Peptides and ProteinsOncogene Proteins, FusionReceptor Protein-Tyrosine Kinases

Identifiers

PMID39488530
PMCPMC11531495

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.