Evidence map›Paper›PMID 39487985›Full record

ArticleSTAR protocols2024

Protocol for muscle fiber type and cross-sectional area analysis in cryosections of whole lower mouse hindlimbs.

Edmund Battey, Matthieu Dos Santos, Dipsikha Biswas, Pascal Maire, Kei Sakamoto

Abstract read
In one paragraph

Article in STAR protocols, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 7 papers.

0numbers the graph read from it
0cells of the map it votes in
7citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

7 citing papers in PubMed.

  1. Sustained loss ofbioRxiv : the preprint server for biology · 2026
    Article
  2. Review
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4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

5 authors.

Edmund BatteyNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Capital Region, Denmark; Department of Biomedical Sciences, University of Copenhagen, Copenhagen, Capital Region, Denmark. Electronic address: edmund.battey@sund.ku.dk.
Matthieu Dos SantosDepartment of Molecular Biology, the Hamon Center for Regenerative Science and Medicine, and Senator Paul D. Wellstone Muscular Dystrophy Specialized Research Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Boulevard, Dallas, TX 75390, USA.
Dipsikha BiswasNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Capital Region, Denmark.
Pascal MaireUniversité Paris Cité, Institut Cochin, INSERM, CNRS, 75014 Paris, France.
Kei SakamotoNovo Nordisk Foundation Center for Basic Metabolic Research, University of Copenhagen, Copenhagen, Capital Region, Denmark. Electronic address: kei.sakamoto@sund.ku.dk.

Funding

Characterization of Maf function in muscle atrophyK99AR084549 · NIAMS · UT SOUTHWESTERN MEDICAL CENTER · PI DOS SANTOS, MATTHIEU · 2024 to 2025
$190k
NIAMS NIH HHS K99 AR084549
6 · The paper itself

Abstract

We outline a protocol to visualize all mouse lower hindlimb skeletal muscles simultaneously. We describe procedures for orientating the whole lower hindlimb in gum tragacanth prior to freezing, simplifying the proceeding experimental steps, and enhancing the comprehensiveness of characterizations. We then detail steps for quantifying muscle fiber size and fiber type characteristics in a single cryosection using histochemistry and immunofluorescence. This protocol can be applied to histological and (immuno)histochemical evaluations such as muscle regeneration, fibrosis, enzymatic activity, and glycogen content.

Indexed as

HindlimbMuscle Fibers, SkeletalAnimalsCryoultramicrotomyMiceMuscle, SkeletalCell BiologyCell isolationCell separation/fractionationMetabolismMicroscopyModel OrganismsMolecular Biology

Identifiers

PMID39487985
PMCPMC11565383

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.