Evidence map›Paper›PMID 39487257›Full record

ArticleScientific reports2024

Genome editing of WSSV CRISPR/Cas9 and immune activation extends the survival of infected Penaeus vannamei.

Arnon Pudgerd, Sukanya Saedan, Wanida Santimanawong, Wattana Weerachatyanukul, Pitchanee Jariyapong, Thawatchai Chaijarasphong, Kamonwan Jongsomchai, Kallaya Sritunyalucksana, Rapeepun Vanichviriyakit, Charoonroj Chotwiwatthanakun

Abstract read
In one paragraph

Article in Scientific reports, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
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  3. Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors.

Arnon PudgerdDivision of Anatomy, School of Medical Sciences, University of Phayao, Maeka, Muang, Phayao, 56000, Thailand.
Sukanya SaedanCenter of Excellence for Shrimp Molecular Biology and Biotechnology (Centex Shrimp), Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand.
Wanida SantimanawongCenter of Excellence for Shrimp Molecular Biology and Biotechnology (Centex Shrimp), Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand.
Wattana WeerachatyanukulDepartment of Anatomy, Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand.
Pitchanee JariyapongSchool of Medicine, Walailak University, Thasala District, Nakhonsrithammarat, 80161, Thailand.
Thawatchai ChaijarasphongCenter of Excellence for Shrimp Molecular Biology and Biotechnology (Centex Shrimp), Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand.
Kamonwan JongsomchaiDivision of Anatomy, School of Medical Sciences, University of Phayao, Maeka, Muang, Phayao, 56000, Thailand.
Kallaya SritunyalucksanaAquatic Animal Health Research Team (AQHT), Integrative Aquaculture Biotechnology Research Group, National Center for Genetic Engineering and Biotechnology (BIOTEC), National Science and Technology Development Agency (NSTDA), Yothi office, Rama VI Road, Ratchathewi, Bangkok, 10400, Thailand.
Rapeepun VanichviriyakitCenter of Excellence for Shrimp Molecular Biology and Biotechnology (Centex Shrimp), Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand.
Charoonroj ChotwiwatthanakunCenter of Excellence for Shrimp Molecular Biology and Biotechnology (Centex Shrimp), Faculty of Science, Mahidol University, Rama VI Rd, Bangkok, 10400, Thailand. charoonroj.cho@mahidol.ac.th.

Funding

Mahidol University (Fundamental Fund: fiscal year 2023 by National Science Research and Innovation Fund (NSRF)) FF-056/2566National Research Council of Thailand (NRCT: High-Potential Research Team Grant Program) N42A650869School of Medical Sciences, University of Phayao MS221009Thailand Science Research and Innovation Fund and the University of Phayao FF64-RIM036
6 · The paper itself

Abstract

White spot syndrome virus (WSSV) is an exceptionally harmful virus that generally causes high levels of mortality in cultured shrimp. Attempts at viral suppression have been made to control the disease and have achieved limited efficiency. Recent advances in genome editing technology using CRISPR/Cas9 have led to potential innovations to prevent or treat many viral diseases. In this study, a CRISPR/Cas9 system was applied to WSSV genome cleavage to suppress WSSV infection in shrimp. The U6 promoter sequence was identified. A chimeric DNA vector consisting of the shrimp U6 promoter with gRNA expression sequences specific to two sites of the WSSV genome and the WSSV ribonucleotide reductase promoter with the Cas9 DNA sequence in pAC-sgRNA-Cas9 was constructed. The expression of gRNAs specific to the WSSV genome and Cas9 was determined in primary cultured hemocyte cells and in shrimp tissue via RT‒PCR. The efficacy of CRISPR/Cas9-WSSV for WSSV genome cleavage was determined in vitro and against WSSV-infected Penaeus vannamei. The reaction of synthetic gRNAs and recombinant Cas9 was able to cleave WSSV DNA amplicons, and shrimp that received CRISPR/Cas9-WSSV presented significantly lower WSSV DNA. In addition to interfering with viral DNA propagation, CRISPR/Cas9-WSSV encapsulated with IHHNV-VLP also stimulated an immune-related gene response. Treatment with CRISPR/Cas9-WSSV against WSSV challenge resulted in a significantly longer survival period. This finding has led to the development and application of a CRISPR/Cas9 system for WSSV infectious disease control, which could be used for managing shrimp aquaculture in the future.

Indexed as

CRISPR-Cas SystemsGene EditingPenaeidaeWhite spot syndrome virus 1AnimalsGenome, ViralCRISPR/Cas9 systemIHHNV-VLPImmune systemP. VannameiWSSV

Identifiers

PMID39487257
PMCPMC11530655

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LicenceCC BY-NC-ND
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.