Evidence map›Paper›PMID 39486437›Full record

ArticleThe journal of physical chemistry letters2024

Heterogeneous Slowdown of Dynamics in the Condensate of an Intrinsically Disordered Protein.

Saumyak Mukherjee, Lars V Schäfer

Erratum issuedAbstract read
In one paragraph

Article in The journal of physical chemistry letters, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed.

  1. Condensates as Conformation Editors of Disordered Client Proteins.Journal of the American Chemical Society · 2026
    Article
  2. Article
  3. Article
  4. Material properties of biomolecular condensates emerge from nanoscale dynamics.Proceedings of the National Academy of Sciences of the United States of America · 2025
    Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

2 authors.

Saumyak MukherjeeCenter for Theoretical Chemistry, Ruhr University Bochum, 44780 Bochum, Germany.ORCID 0000-0003-2196-3423
Lars V SchäferCenter for Theoretical Chemistry, Ruhr University Bochum, 44780 Bochum, Germany.ORCID 0000-0002-8498-3061

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The high concentration of proteins and other biological macromolecules inside biomolecular condensates leads to dense and confined environments, which can affect the dynamic ensembles and the time scales of the conformational transitions. Here, we use atomistic molecular dynamics (MD) simulations of the intrinsically disordered low complexity domain (LCD) of the human fused in sarcoma (FUS) RNA-binding protein to study how self-crowding inside a condensate affects the dynamic motions of the protein. We found a heterogeneous retardation of the protein dynamics in the condensate with respect to the dilute phase, with large-amplitude motions being strongly slowed by up to 2 orders of magnitude, whereas small-scale motions, such as local backbone fluctuations and side-chain rotations, are less affected. The results support the notion of a liquid-like character of the condensates and show that different protein motions respond differently to the environment.

Indexed as

Intrinsically Disordered ProteinsMolecular Dynamics SimulationRNA-Binding Protein FUSBiomolecular CondensatesHumansProtein ConformationProtein DomainsFUS protein, humanIntrinsically Disordered ProteinsRNA-Binding Protein FUS

Identifiers

PMID39486437
PMCPMC11571228

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.