Evidence map›Paper›PMID 39484518›Full record

ArticlebioRxiv : the preprint server for biology2024

Oncogenic Alterations, Race, and Survival in US Veterans with Metastatic Prostate Cancer Undergoing Somatic Tumor Next Generation Sequencing.

Luca F Valle, Jiannong Li, Heena Desai, Ryan Hausler, Candace Haroldsen, Monica Chatwal, Matthias Ojo, Michael J Kelley, Timothy Rebbeck, Brent S Rose and 5 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Luca F ValleRadiation Oncology Service, VA Greater Los Angeles Healthcare System, Los Angeles, CA 90073.
Jiannong LiDepartment of Biostatistics and Bioinformatics, H. Lee Moffitt Cancer Center, Tampa FL.
Heena DesaiCorporal Michael Crescenz VA Medical Center, Philadelphia, PA 19146; Department of Medicine.
Ryan HauslerCorporal Michael Crescenz VA Medical Center, Philadelphia, PA 19146; Department of Medicine.
Candace HaroldsenDepartment of Internal Medicine/Division of Epidemiology, University of Utah and VA Salt Lake City Healthcare System 84113.
Monica ChatwalDepartment of Genitourinary Oncology, H. Lee Moffitt Cancer Center, Tampa, FL.
Matthias OjoCharles R. Drew University School of Medicine and Science, Los Angeles, CA 90025.
Michael J KelleyNational Oncology Program, Department of Veterans Affairs, Washington DC 20420.
Timothy RebbeckHarvard TH Chan School of Public Health and Dana-Farber Cancer Institute, Boston, MA, 02215.
Brent S RoseDepartment of Radiation Medicine and Applied Sciences, University of California San Diego School of Medicine, La Jolla, CA, 92093.
Matthew B RettigDepartment of Medicine, VA Greater Los Angeles Healthcare System, Los Angeles, CA 90073.
Nicholas G NickolsRadiation Oncology Service, VA Greater Los Angeles Healthcare System, Los Angeles, CA 90073.
Isla P GarrawayJonsson Comprehensive Cancer Center, Los Angeles, CA 90095.
Kosj YamoahRadiation Oncology Service, James Haley VA Medical Center, Tampa, FL 33612.
Kara N MaxwellCorporal Michael Crescenz VA Medical Center, Philadelphia, PA 19146; Department of Medicine.ORCID 0000-0001-8192-4202

Funding

UCLA SPORE IN PROSTATE CANCERP50CA092131 · NCI · UNIVERSITY OF CALIFORNIA LOS ANGELES · PI REITER, ROBERT E · 2002 to 2023
$42.6M
Mechanisms of Prostate Cancer MetastasisR01CA271750 · NCI · CEDARS-SINAI MEDICAL CENTER · PI FREEMAN, MICHAEL R., GARRAWAY, ISLA PEARL · 2021 to 2025
$2.2M
A genotype-phenotype study of tumors from patients with inherited mutations in DNA repair genesK08CA215312 · NCI · UNIVERSITY OF PENNSYLVANIA · PI MAXWELL, KARA N · 2018 to 2022
$924k
Predicting Metastatic Progression of High Risk Localized Prostate CancerI01CX002622 · VA · VA GREATER LOS ANGELES HEALTHCARE SYSTEM · PI Isla Pearl Garraway, BEATRICE S KNUDSEN · 2023 to 2026
–
Mutational processes underlying tumor development in United States VeteransI01CX002709 · VA · PHILADELPHIA VA MEDICAL CENTER · PI MICHAEL J KELLEY, KARA N MAXWELL · 2024 to 2026
–
CSRD VA I01 CX002622CSRD VA I01 CX002709NCI NIH HHS K08 CA215312NCI NIH HHS P50 CA092131NCI NIH HHS R01 CA271750
6 · The paper itself

Abstract

Purpose: National guidelines recommend next generation sequencing (NGS) of tumors in patients diagnosed with metastatic prostate cancer (mPCa) to identify potential actionable alterations. We sought to describe the spectrum and frequency of alterations in PCa-related genes and pathways, as well as associations with self-identified race/ethnicity, and overall survival in US Veterans. Patients and Methods: This retrospective cohort study included Non-Hispanic Black (NHB) and Non-Hispanic white (NHW) Veterans with mPCa who obtained NGS through the Veterans Affairs National Precision Oncology Program. 45 genes in seven canonical or targetable mPCa pathways were evaluated in addition to TMB and MSI status. Multivariable logistic regression evaluated associations between race/ethnicity and genomic alteration frequencies. Cox proportional hazards models were used to determine associations between race/ethnicity, specific gene/pathway alteration, and overall survival. Results: 5,015 Veterans with mPCa who had NGS conducted were included (1,784 NHB, 3,231 NHW). NHB Veterans were younger, had higher PSA at diagnosis, were less likely to report Agent Orange exposure, and resided in more deprived neighborhoods compared to NHW Veterans. Nine of the top ten most commonly altered genes were the same in NHB v NHW Veterans; however, the frequencies of alterations varied by race/ethnicity. NHB race/ethnicity was associated with higher odds of genomic alterations in Conclusion: In the equal access VA healthcare setting, Veterans undergoing NGS for mPCa exhibited differences in alteration frequencies in both actionable and non-actionable pathways that may be associated with survival. This analysis affirms the utility of genomic testing for identifying candidates irrespective of race/ethnicity for precision oncology treatments, which could contribute to equitable outcomes in patients with mPCa.

Identifiers

PMID39484518
PMCPMC11527339

What OpenQuestion holds

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LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.