Evidence map›Paper›PMID 39484510›Full record

ArticlebioRxiv : the preprint server for biology2024

Single-chain nanobody inhibition of Notch and avidity enhancement utilizing the β-pore forming toxin Aerolysin.

Andrew C D Lemmex, Jeremy Allred, Jason Ostergard, Jake Trask, Hannah N Bui, Michael J M Anderson, Benjamin Kopp, Oakley Streeter, Adam T Smiley, Natalia S Babilonia-Díaz and 5 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

15 authors.

Andrew C D LemmexUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.ORCID 0000-0003-4969-4317
Jeremy AllredUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.ORCID 0000-0003-1694-288X
Jason OstergardUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Jake TraskUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Hannah N BuiUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Michael J M AndersonUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Benjamin KoppUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Oakley StreeterUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Adam T SmileyUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.ORCID 0000-0002-3891-8242
Natalia S Babilonia-DíazUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Bruce R BlazarUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
LeAnn HigginsUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Peter M GordonUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Joseph M MurettaUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.
Wendy R GordonUniversity of Minnesota, Twin Cities. Minneapolis, MN 55409.ORCID 0000-0001-7696-5560

Funding

TRAINING FOR FUTURE BIOTECHNOLOGY DEVELOPMENTT32GM008347 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI SCHMIDT-DANNERT, CLAUDIA · 1990 to 2021
$11.0M
Mechanism and modulation of Amyloid Precursor Protein proteolysisR35GM119483 · NIGMS · UNIVERSITY OF MINNESOTA · PI WENDY RYAN GORDON · 2016 to 2026
$4.6M
Engineering Protein Modulators of Notch Activation for T-cell immunotherapyR33CA272331 · NCI · UNIVERSITY OF MINNESOTA · PI GORDON, WENDY RYAN, MURETTA, JOSEPH M. · 2023 to 2025
$1.1M
NCI NIH HHS R33 CA272331NIGMS NIH HHS R35 GM119483NIGMS NIH HHS T32 GM008347
6 · The paper itself

Abstract

Notch plays critical roles in developmental processes and disease pathogenesis, which has led to numerous efforts to modulate its function with small molecules and antibodies. Here we present a nanobody inhibitor of Notch signaling, derived from a synthetic phage-display library targeting the notch Negative Regulatory Region (NRR). The nanobody inhibits Notch signaling in a luciferase reporter assay and in Notch-dependent hematopoietic progenitor cell differentiation assay, despite a modest 19uM affinity for Notch. We addressed the low affinity by fusion to a membrane-associating domain derived from the β-Pore forming toxin Aerolysin, resulting in a significantly improved IC50 for Notch inhibition. The nanobody-aerolysin fusion inhibits proliferation of T-ALL cell lines with similar efficacy to other Notch pathway inhibitors. Overall, this study reports the development of a Notch inhibitory antibody, and demonstrates a proof-of-concept for a generalizable strategy to increase the efficacy and potency of low-affinity antibody binders.

Identifiers

PMID39484510
PMCPMC11526928

What OpenQuestion holds

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LicenceCC BY-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.