Evidence map›Paper›PMID 39484504›Full record

ArticlebioRxiv : the preprint server for biology2024

SARS-CoV-2 within-host population expansion, diversification and adaptation in zoo tigers, lions and hyenas.

Laura Bashor, Emily N Gallichotte, Michelle Galvan, Katelyn Erbeck, Lara Croft, Katelyn Stache, Mark Stenglein, James G Johnson, Kristy Pabilonia, Sue VandeWoude

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2024. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

10 authors.

Laura BashorDept. of Microbiology, Immunology and Pathology, Colorado State University.ORCID 0000-0002-8609-1219
Emily N GallichotteDept. of Microbiology, Immunology and Pathology, Colorado State University.
Michelle GalvanDept. of Microbiology, Immunology and Pathology, Colorado State University.
Katelyn ErbeckColorado State University Veterinary Diagnostic Laboratories.
Lara CroftMorris Animal Foundation.
Katelyn StacheDenver Zoo Conservation Alliance.
Mark StengleinDept. of Microbiology, Immunology and Pathology, Colorado State University.
James G JohnsonDenver Zoo Conservation Alliance.
Kristy PabiloniaColorado State University Veterinary Diagnostic Laboratories.
Sue VandeWoudeDept. of Microbiology, Immunology and Pathology, Colorado State University.

Funding

NIH Prior Approval Process ProfessionalUL1TR002535 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2018 to 2022
$51.1M
CSU Infectious Disease Research and Response Training ProgramT32AI162691 · NIAID · COLORADO STATE UNIVERSITY · PI DEAN, GREGG A · 2021 to 2025
$2.1M
MARC at Colorado State UniversityT34GM140958 · NIGMS · COLORADO STATE UNIVERSITY · PI Gregg A Dean, SANDRA L QUACKENBUSH · 2022 to 2026
$1.9M
NCATS NIH HHS UL1 TR002535NIAID NIH HHS T32 AI162691NIGMS NIH HHS T34 GM140958
6 · The paper itself

Abstract

SARS-CoV-2 rapidly adapts to new hosts following cross-species transmission; this is highly relevant as novel within-host variants have emerged following infection of susceptible wild and domestic animal species. Furthermore, SARS-CoV-2 transmission from animals (e.g., white-tailed deer, mink, domestic cats, and others) back to humans has also been observed, documenting the potential of novel animal-derived variants to infect humans. We investigated SARS-CoV-2 evolution and host-specific adaptation during an outbreak in Amur tigers (

Indexed as

SARS-CoV-2spillovervirus evolutionwithin-host variants

Identifiers

PMID39484504
PMCPMC11527109

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.